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cg2_3.0_scaffold_2854_c

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_2854_c_1
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(305..1705)
DNA (1401bp) protein (467aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035E26E1
peptidase M23B Tax=CG_Nomura_04
peptidase M23 family protein
cg2_3.0_scaffold_2854_c_2
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(1680..2327)
DNA (648bp) protein (216aa)
ctc; 50S ribosomal protein L25; K02897 large subunit ribosomal protein L25 Tax=CG_Nomura_04
50S ribosomal protein L25; K02897 large subunit ribosomal protein L25 id=5227043 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
ctc; 50S ribosomal protein L25
cg2_3.0_scaffold_2854_c_3
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(2470..3336)
DNA (867bp) protein (289aa)
Tagatose-bisphosphate aldolase; K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13] Tax=CG_Nomura_04
Tagatose-bisphosphate aldolase; K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13] id=5803347 bin=OD1_GWC2_34_28 species=Sulfobacillus acidophilus genus=Sulfobacillus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Tagatose-bisphosphate aldolase
cg2_3.0_scaffold_2854_c_4
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(3366..4565)
DNA (1200bp) protein (400aa)
Thrombospondin 3-like protein n=1 Tax=uncultured bacterium RepID=K1XEY3_9BACT
hypothetical protein Tax=CG_Nomura_04
Thrombospondin type 3 repeat-containing protein
cg2_3.0_scaffold_2854_c_5
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(4562..6514)
DNA (1953bp) protein (651aa)
Putative uncharacterized protein n=4 Tax=Bacteroides RepID=A7LRC3_BACOV id=133058 bin=ACD81 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein Tax=CG_Nomura_04
hypothetical protein
cg2_3.0_scaffold_2854_c_6
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

6696..7691
DNA (996bp) protein (332aa)
putative Ribokinase (EC:2.7.1.15) Tax=CG_Nomura_04
carbohydrate kinase PfkB; K00852 ribokinase [EC:2.7.1.15] id=5803344 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Sugar kinase, ribokinase family
cg2_3.0_scaffold_2854_c_7
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(7757..9115)
DNA (1359bp) protein (453aa)
Two-component sensor histidine kinase n=1 Tax=uncultured bacterium RepID=K2FCI6_9BACT
multi-sensor signal transduction histidine kinase Tax=CG_Nomura_04
multi-sensor signal transduction histidine kinase
cg2_3.0_scaffold_2854_c_8
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(9119..10957)
DNA (1839bp) protein (613aa)
S-layer protein Tax=CG_Nomura_04
seg 297..318 id=130675 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
S-layer protein
cg2_3.0_scaffold_2854_c_9
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(10968..11942)
DNA (975bp) protein (325aa)
transketolase; K00615 transketolase [EC:2.2.1.1] Tax=CG_Nomura_04
transketolase; K00615 transketolase [EC:2.2.1.1] id=5803342 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
transketolase
cg2_3.0_scaffold_2854_c_10
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(11960..12856)
DNA (897bp) protein (299aa)
tktB; transketolase N-terminal domain protein (EC:2.2.1.1) Tax=CG_Nomura_04
transketolase (EC:2.2.1.1); K00615 transketolase [EC:2.2.1.1] id=5803341 bin=OD1_GWC2_34_28 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
tktB; transketolase N-terminal domain protein (EC:2.2.1.1)
cg2_3.0_scaffold_2854_c_11
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(12880..13551)
DNA (672bp) protein (224aa)
hypothetical protein ; K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] Tax=CG_Nomura_04
ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] id=5803340 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
cg2_3.0_scaffold_2854_c_12
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(13560..14030)
DNA (471bp) protein (157aa)
ribose-5-phosphate isomerase B; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] Tax=CG_Nomura_04
ribose-5-phosphate isomerase B; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] id=5803339 bin=OD1_GWC2_34_28 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ribose-5-phosphate isomerase B
cg2_3.0_scaffold_2854_c_13
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(14044..15081)
DNA (1038bp) protein (346aa)
gapB; glyceraldehyde 3-phosphate dehydrogenase (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] Tax=CG_Nomura_04
gapB; glyceraldehyde 3-phosphate dehydrogenase (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] id=5803336 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
gapB; glyceraldehyde 3-phosphate dehydrogenase (EC:1.2.1.12)
cg2_3.0_scaffold_2854_c_14
unknown

Not on your lists

15183..15350
DNA (168bp) protein (56aa)

This feature has no annotations

cg2_3.0_scaffold_2854_c_15
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(15324..16001)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000361D698
transpanse Tax=CG_Nomura_04
hypothetical protein
cg2_3.0_scaffold_2854_c_16
RIFOXYC1_FULL_RIF_OD1_09_52_10_curated, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(16126..17583)
DNA (1458bp) protein (486aa)
Glycoside hydrolase family 2 sugar binding protein Tax=RIFOXYC1_FULL_RIF_OD1_09_52_10_curated
LamG-like jellyroll fold id=5803337 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cell surface receptor IPT/TIG domain-containing protein
Displaying 16 items

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