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cg2_3.0_scaffold_1740_c

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_1740_c_1
R_RIF_OD1_11_51_15, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

3..815
DNA (813bp) protein (271aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_11_51_15_curated
von Willebrand factor type A id=2072966 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
SipW-cognate class signal peptide
cg2_3.0_scaffold_1740_c_2
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

949..1800
DNA (852bp) protein (284aa)
hypothetical protein Tax=CG_Nomura_04
von Willebrand factor type A id=2072966 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
SipW-cognate class signal peptide
cg2_3.0_scaffold_1740_c_3
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

1785..2330
DNA (546bp) protein (182aa)
Conserved repeat domain n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MC2_MESSB id=5086595 bin=GWF1_OP11_31_35_complete species=unknown genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
putative repeat protein
Conserved repeat domain Tax=CG_Nomura_04
cg2_3.0_scaffold_1740_c_4
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

2443..3390
DNA (948bp) protein (316aa)
von Willebrand factor type A Tax=CG_Nomura_04
hypothetical protein id=5803590 bin=OD1_GWC2_34_28 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
von Willebrand factor type A
cg2_3.0_scaffold_1740_c_5
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

3398..4057
DNA (660bp) protein (220aa)
signal peptidase-1 (EC:3.4.11.1)
sipW; type I signal peptidase SipW Tax=CG_Nomura_04
Type I signal peptidase id=2193903 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
cg2_3.0_scaffold_1740_c_6
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

4065..5810
DNA (1746bp) protein (582aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_1740_c_7
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(5807..6937)
DNA (1131bp) protein (377aa)
Adenine nucleotide alpha hydrolase superfamily protein n=1 Tax=uncultured bacterium CSLC2 RepID=Q8KP02_9BACT
hypothetical protein Tax=CG_Nomura_04
hypothetical protein
cg2_3.0_scaffold_1740_c_8
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

7208..7747
DNA (540bp) protein (180aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_1740_c_9
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(7869..9062)
DNA (1194bp) protein (398aa)
glycoside hydrolase family 15 n=1 Tax=Virgibacillus halodenitrificans RepID=UPI0002E722AD
glycoside hydrolase 15-like protein; K07190 phosphorylase kinase alpha/beta subunit Tax=CG_Nomura_04
glycoside hydrolase family 15
cg2_3.0_scaffold_1740_c_10
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(9323..10690)
DNA (1368bp) protein (456aa)
phosphomannomutase (EC:5.4.2.8); K01840 phosphomannomutase [EC:5.4.2.8] Tax=CG_Nomura_04
phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3H3_SPHTD
cg2_3.0_scaffold_1740_c_11
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

10708..10989
DNA (282bp) protein (94aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_1740_c_12
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

11028..11135
DNA (108bp) protein (36aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_1740_c_13
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(11213..11410)
DNA (198bp) protein (66aa)
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=CG_Nomura_04
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) id=5803642 bin=OD1_GWC2_34_28 species=Blastopirellula marina genus=Blastopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
cg2_3.0_scaffold_1740_c_14
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(11599..11718)
DNA (120bp) protein (40aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_1740_c_15
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(11740..11976)
DNA (237bp) protein (79aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_1740_c_16
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(12096..13349)
DNA (1254bp) protein (418aa)
Flavoprotein family protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZ21_9BACT
flavoprotein; K07007 Tax=CG_Nomura_04
flavoprotein
cg2_3.0_scaffold_1740_c_17
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

13514..14116
DNA (603bp) protein (201aa)
hypothetical protein Tax=CG_Nomura_04
hypothetical protein id=5803629 bin=OD1_GWC2_34_28 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
cg2_3.0_scaffold_1740_c_18
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(14122..14670)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JWF2_BURP8
hypothetical protein Tax=CG_Nomura_04
hypothetical protein
cg2_3.0_scaffold_1740_c_19
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(14697..14987)
DNA (291bp) protein (97aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_1740_c_20
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(15391..15642)
DNA (252bp) protein (84aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_1740_c_21
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

15695..16105
DNA (411bp) protein (137aa)
Tax=CG_Nomura_04
cg2_3.0_scaffold_1740_c_22
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(16190..16999)
DNA (810bp) protein (270aa)
hypothetical protein
seg Tax=CG_Nomura_04
seg id=5803626 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg2_3.0_scaffold_1740_c_23
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(17042..17977)
DNA (936bp) protein (312aa)
ErfK/YbiS/YcfS/YnhG protein Tax=CG_Nomura_04
ErfK/YbiS/YcfS/YnhG family protein id=5803625 bin=OD1_GWC2_34_28 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ErfK/YbiS/YcfS/YnhG protein
cg2_3.0_scaffold_1740_c_24
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

18132..19418
DNA (1287bp) protein (429aa)
RelA/SpoT domain-containing protein Tax=CG_Nomura_04
RelA/SpoT domain protein id=4366178 bin=GWF2_Melioribacter_38_21 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
RelA/SpoT domain-containing protein
cg2_3.0_scaffold_1740_c_25
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

19607..21061
DNA (1455bp) protein (485aa)
ABC transporter-like protein; K06158 ATP-binding cassette, subfamily F, member 3 Tax=CG_Nomura_04
ABC transporter family protein; K06158 ATP-binding cassette, subfamily F, member 3 id=5803638 bin=OD1_GWC2_34_28 species=Clostridium carboxidivorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
cg2_3.0_scaffold_1740_c_26
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(21216..22151)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PMI8_9BACT
hypothetical protein Tax=CG_Nomura_04
hypothetical protein
cg2_3.0_scaffold_1740_c_27
Chlorobium phaeobacteroides, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(22421..23029)
DNA (609bp) protein (203aa)
Putative uncharacterized protein n=1 Tax=Chlorobium phaeobacteroides (strain BS1) RepID=B3EKI6_CHLPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE03164.1}; TaxID=331678 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium
Displaying 27 items

View Taxonomy