ggKbase home page

cg2_3.0_scaffold_12957_c

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_12957_c_1
GWB1_OD1_57_6, Parcubacteria, Bacteria

Not on your lists

3..350
DNA (348bp) protein (116aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW46895.1}; TaxID=1618889 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_57_6.;"
cg2_3.0_scaffold_12957_c_2
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

341..892
DNA (552bp) protein (184aa)
seg Tax=CG_CPR09_01
seg id=5803072 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg2_3.0_scaffold_12957_c_3
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

910..2907
DNA (1998bp) protein (666aa)
NAD-dependent DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] Tax=CG_CPR09_01
DNA ligase; K01972 DNA ligase (NAD+) [EC:6.5.1.2] id=5803071 bin=OD1_GWC2_34_28 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
NAD-dependent DNA ligase (EC:6.5.1.2)
cg2_3.0_scaffold_12957_c_4
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

2921..3235
DNA (315bp) protein (105aa)
glutamyl-tRNA amidotransferase subunit C n=1 Tax=Paenibacillus elgii RepID=UPI000248D742
glutamyl-tRNA amidotransferase subunit C Tax=CG_CPR09_01
cg2_3.0_scaffold_12957_c_5
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

3228..4667
DNA (1440bp) protein (480aa)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=CG_CPR09_01
glutamyl-tRNA(Gln) amidotransferase subunit A; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] id=5803067 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A
cg2_3.0_scaffold_12957_c_6
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

4692..5267
DNA (576bp) protein (192aa)
transmembrane_regions Tax=CG_CPR09_01
transmembrane_regions id=5803066 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg2_3.0_scaffold_12957_c_trna_1
unknown

Not on your lists

5306..5376
DNA (71bp)
transferRNA
cg2_3.0_scaffold_12957_c_7
GWB1_OD1_47_6, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

5477..5725
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CFD9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKU75587.1}; TaxID=1618655 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_47_6b.;"
hypothetical protein
cg2_3.0_scaffold_12957_c_8
R_OD1_Campbellbacteria_35_12, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists

comp(6223..6984)
DNA (762bp) protein (254aa)
serine/threonine protein kinase (EC:2.7.-.-) Tax=RIFCSPLOWO2_02_OD1_Campbellbacteria_35_12_curated
Putative uncharacterized protein n=1 Tax=Campylobacter coli RM2228 RepID=Q4HEF0_CAMCO id=95879 bin=ACD63 species=Campylobacter coli genus=Campylobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
Displaying 9 items

View Taxonomy