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cg2_3.0_scaffold_3139_c

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_3139_c_1
R_OD1_Kaiserbacteria_53_29, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(119..337)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZRZ0_9BACT
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPHIGHO2_01_FULL_OD1_Kaiserbacteria_53_29_curated
ECF subfamily RNA polymerase sigma-24 factor
cg2_3.0_scaffold_3139_c_2
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(549..857)
DNA (309bp) protein (103aa)
Tax=CG_CPR09_01
cg2_3.0_scaffold_3139_c_3
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(1108..1434)
DNA (327bp) protein (109aa)
Tax=CG_CPR09_01
cg2_3.0_scaffold_3139_c_4
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

1510..1752
DNA (243bp) protein (81aa)
putative L-lactate permease; K03303 lactate transporter, LctP family Tax=CG_CPR09_01
L-lactate permease id=5227168 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
putative L-lactate permease
cg2_3.0_scaffold_3139_c_5
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

1823..2749
DNA (927bp) protein (309aa)
D-alanyl-D-alanine carboxypeptidase Tax=CG_CPR09_01
peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin id=5803630 bin=OD1_GWC2_34_28 species=Dolosigranulum pigrum genus=Dolosigranulum taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
D-alanyl-D-alanine carboxypeptidase
cg2_3.0_scaffold_3139_c_6
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

2794..3456
DNA (663bp) protein (221aa)
PA-phosphatase-like phosphoesterase protein Tax=CG_CPR09_01
PA-phosphatase-like phosphoesterase protein
Phosphoesterase PA-phosphatase related protein id=1878043 bin=GWE2_CPR3_35_7 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=GWE2_CPR3_35_7 organism_group=CPR3 organism_desc=Good
cg2_3.0_scaffold_3139_c_7
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

3503..3964
DNA (462bp) protein (154aa)
Tax=CG_CPR09_01
cg2_3.0_scaffold_3139_c_trna_3
unknown

Not on your lists

comp(3973..4045)
DNA (73bp)
transferRNA
cg2_3.0_scaffold_3139_c_8
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(4072..4884)
DNA (813bp) protein (271aa)
CheA signal transduction histidine kinase Tax=CG_CPR09_01
Two-component sensor kinase id=1743936 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
CheA signal transduction histidine kinase
cg2_3.0_scaffold_3139_c_9
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(4894..6705)
DNA (1812bp) protein (604aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI0003751E19
PAS domain-containing protein Tax=CG_CPR09_01
PAS domain-containing protein
cg2_3.0_scaffold_3139_c_10
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(6721..6918)
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000377B1C0
hypothetical protein Tax=CG_CPR09_01
cg2_3.0_scaffold_3139_c_11
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(6934..7332)
DNA (399bp) protein (133aa)
Marine sediment metagenome DNA, contig: S01H1_S07543 Tax=CG_CPR09_01
cg2_3.0_scaffold_3139_c_trna_2
unknown

Not on your lists

comp(7513..7586)
DNA (74bp)
transferRNA
cg2_3.0_scaffold_3139_c_trna_1
unknown

Not on your lists

comp(7626..7698)
DNA (73bp)
transferRNA
cg2_3.0_scaffold_3139_c_12
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(7852..8814)
DNA (963bp) protein (321aa)
ddlA; protein DdlA (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=CG_CPR09_01
ddlA; protein DdlA (EC:6.3.2.4)
D-alanine--D-alanine ligase id=5226939 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
cg2_3.0_scaffold_3139_c_13
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(8820..10091)
DNA (1272bp) protein (424aa)
uvrC; UvrABC system protein C Tax=CG_CPR09_01
UvrABC system protein C; K03703 excinuclease ABC subunit C id=5803631 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
uvrC; UvrABC system protein C
cg2_3.0_scaffold_3139_c_14
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(10102..12801)
DNA (2700bp) protein (900aa)
uvrA; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A Tax=CG_CPR09_01
uvrA; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A id=5803632 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
uvrA; excinuclease ABC subunit A
cg2_3.0_scaffold_3139_c_15
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(12764..14806)
DNA (2043bp) protein (681aa)
excinuclease ABC subunit B; K03702 excinuclease ABC subunit B Tax=CG_CPR09_01
UvrB; excinuclease ABC subunit B; K03702 excinuclease ABC subunit B id=5803633 bin=OD1_GWC2_34_28 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
excinuclease ABC subunit B
cg2_3.0_scaffold_3139_c_16
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(14754..16007)
DNA (1254bp) protein (418aa)
queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] Tax=CG_CPR09_01
queuine tRNA-ribosyltransferase (TGT); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] id=5803609 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
cg2_3.0_scaffold_3139_c_17
R_OD1_Kaiserbacteria_53_31, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

16119..16574
DNA (456bp) protein (152aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Kaiserbacteria_53_31_curated
Displaying 20 items

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