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cg_3.0_sub10_scaffold_34_c

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_3.0_sub10_scaffold_34_c_1

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413..775
-----------------
DNA (363bp)
protein (121aa)
Marine sediment metagenome DNA, contig: S03H2_C01139 {ECO:0000313|EMBL:GAH29573.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
cg_3.0_sub10_scaffold_34_c_2
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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1062..1385
-----------------
DNA (324bp)
protein (108aa)
ArsR family transcriptional regulator n=1 Tax=Paenibacillus sp. JC66 RepID=UPI00028907D0
Regulatory protein, ArsR Tax=CG_Solirubrobact_01
ArsR family transcriptional regulator
cg_3.0_sub10_scaffold_34_c_3
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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1482..3506
-----------------
DNA (2025bp)
protein (675aa)
hyfB; formate hydrogenlyase, membrane subunit Tax=CG_Solirubrobact_01
NADH dehydrogenase (Quinone) id=4074710 bin=GWA2_Ignavibacteria_55_11 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hyfB; formate hydrogenlyase, membrane subunit
cg_3.0_sub10_scaffold_34_c_4
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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3508..4458
-----------------
DNA (951bp)
protein (317aa)
Similar to membrane-bound [NiFe]-hydrogenase-3, subunit D n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML60_9BACT
hycD; membrane-bound [NiFe]-hydrogenase-3, subunit D Tax=CG_Solirubrobact_01
hycD; membrane-bound [NiFe]-hydrogenase-3, subunit D
cg_3.0_sub10_scaffold_34_c_5
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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4460..5119
-----------------
DNA (660bp)
protein (220aa)
hydrogenase 4 membrane component (E); K12140 hydrogenase-4 component E [EC:1.-.-.-] Tax=CG_Solirubrobact_01
Hydrogenase, membrane subunit 2-like protein id=3669706 bin=GWC2_Ignavibacteria_56_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
hydrogenase 4 membrane component (E)
cg_3.0_sub10_scaffold_34_c_6
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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5122..6582
-----------------
DNA (1461bp)
protein (487aa)
hydrogenase, membrane subunit 1-like protein (EchA-like); K12141 hydrogenase-4 component F [EC:1.-.-.-] Tax=CG_Solirubrobact_01
Hydrogenase, membrane subunit 1-like protein (EchA-like) n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W2B8_UNCMA rbh
hydrogenase, membrane subunit 1-like protein (EchA-like)
cg_3.0_sub10_scaffold_34_c_7
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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6585..8210
-----------------
DNA (1626bp)
protein (542aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036597A3
hydrogenase, large subunit-like protein (HycE-like) Tax=CG_Solirubrobact_01
hydrogenase, large subunit-like protein (HycE-like)
cg_3.0_sub10_scaffold_34_c_8
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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8220..9002
-----------------
DNA (783bp)
protein (261aa)
Formate hydrogenlyase subunit 7 Tax=CG_Solirubrobact_01
NADH ubiquinone oxidoreductase 20 kDa subunit id=3114604 bin=GWA2_Ignavibacteria_55_11 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hycG; formate hydrogenlyase subunit 7
cg_3.0_sub10_scaffold_34_c_9
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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9102..11399
-----------------
DNA (2298bp)
protein (766aa)
DEAD/DEAH box helicase; K06877 DEAD/DEAH box helicase domain-containing protein Tax=CG_Solirubrobact_01
DEAD/DEAH box helicase; K06877 DEAD/DEAH box helicase domain-containing protein id=24439018 bin=RBG_19FT_COMBO_GAL15_69_19 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
DEAD/DEAH box helicase
cg_3.0_sub10_scaffold_34_c_10
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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comp(11383..12390)
-----------------
DNA (1008bp)
protein (336aa)
Cation efflux family protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MJ03_9BACT
cation efflux family protein Tax=CG_Solirubrobact_01
cation efflux family protein
cg_3.0_sub10_scaffold_34_c_11
unknown

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12521..12949
-----------------
DNA (429bp)
protein (143aa)

This feature has no annotations

cg_3.0_sub10_scaffold_34_c_12
unknown

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12906..13397
-----------------
DNA (492bp)
protein (164aa)

This feature has no annotations

cg_3.0_sub10_scaffold_34_c_13
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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13462..13776
-----------------
DNA (315bp)
protein (105aa)
Regulatory protein ArsR n=1 Tax=Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) RepID=F6B2Q4_DESCC
regulatory protein ArsR Tax=CG_Solirubrobact_01
regulatory protein ArsR
cg_3.0_sub10_scaffold_34_c_14
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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13834..14655
-----------------
DNA (822bp)
protein (274aa)
Methyltransferase type 11 n=2 Tax=Desulfotomaculum RepID=F6B2Q5_DESCC
type 11 methyltransferase Tax=CG_Solirubrobact_01
type 11 methyltransferase
cg_3.0_sub10_scaffold_34_c_15
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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14857..15330
-----------------
DNA (474bp)
protein (158aa)
Putative uncharacterized protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYP2_RUBXD
hypothetical protein; K06966 Tax=CG_Solirubrobact_01
hypothetical protein
cg_3.0_sub10_scaffold_34_c_16
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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15817..16449
-----------------
DNA (633bp)
protein (211aa)
fchA; methenyltetrahydrofolate cyclohydrolase FchA (EC:3.5.4.9) Tax=CG_Solirubrobact_01
fchA; methenyltetrahydrofolate cyclohydrolase FchA (EC:3.5.4.9)
FchA: methenyltetrahydrofolate cyclohydrolase n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0N5L4_DESTT
cg_3.0_sub10_scaffold_34_c_17
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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16507..17376
-----------------
DNA (870bp)
protein (290aa)
folD; methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase; K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.
Bifunctional protein FolD n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0ITB9_9FIRM
folD; methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase
cg_3.0_sub10_scaffold_34_c_18
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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17610..18086
-----------------
DNA (477bp)
protein (159aa)
YbaK/prolyl-tRNA synthetase associated protein Tax=CG_Solirubrobact_01
YbaK/prolyl-tRNA synthetase associated region id=14626147 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
YbaK/prolyl-tRNA synthetase associated protein
cg_3.0_sub10_scaffold_34_c_19
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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18404..20170
-----------------
DNA (1767bp)
protein (589aa)
Putative PAS/PAC sensor protein n=1 Tax=Thermoanaerobacter wiegelii Rt8.B1 RepID=G2MRI5_9THEO
putative PAS/PAC sensor protein Tax=CG_Solirubrobact_01
putative PAS/PAC sensor protein
cg_3.0_sub10_scaffold_34_c_20
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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20284..21618
-----------------
DNA (1335bp)
protein (445aa)
signal transduction histidine kinase LytS; K02478 two-component system, LytT family, sensor kinase [EC:2.7.13.3] Tax=CG_Solirubrobact_01
Signal transduction histidine kinase, LytS n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CWX8_HALOH
signal transduction histidine kinase LytS
cg_3.0_sub10_scaffold_34_c_21
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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21605..22366
-----------------
DNA (762bp)
protein (254aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Thermincola potens (strain JR) RepID=D5XBX4_THEPJ
LytTR family two component transcriptional regulator; K02477 two-component system, LytT family, response regulator Tax=CG_Solirubrobact_01
LytTR family two component transcriptional regulator
cg_3.0_sub10_scaffold_34_c_22
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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22616..24406
-----------------
DNA (1791bp)
protein (597aa)
Formate--tetrahydrofolate ligase (EC:6.3.4.3); K01938 formate--tetrahydrofolate ligase [EC:6.3.4.3] Tax=CG_Solirubrobact_01
Formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Thermincola potens (strain JR) RepID=D5X9M5_THEPJ
cg_3.0_sub10_scaffold_34_c_23
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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24474..26417
-----------------
DNA (1944bp)
protein (648aa)
Ferredoxin n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SM95_9DELT
ferredoxin Tax=CG_Solirubrobact_01
ferredoxin
cg_3.0_sub10_scaffold_34_c_24
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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26566..27327
-----------------
DNA (762bp)
protein (254aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SM94_9DELT
CO dehydrogenase maturation factor Tax=CG_Solirubrobact_01
CO dehydrogenase maturation factor
cg_3.0_sub10_scaffold_34_c_25
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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27411..28352
-----------------
DNA (942bp)
protein (314aa)
CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SM80_9DELT
acetyl-CoA decarbonylase/synthase complex subunit delta Tax=CG_Solirubrobact_01
acetyl-CoA decarbonylase/synthase complex subunit delta
cg_3.0_sub10_scaffold_34_c_26
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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28454..30394
-----------------
DNA (1941bp)
protein (647aa)
carbon-monoxide dehydrogenase, catalytic subunit (EC:1.2.99.2); K00198 carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.99.2] Tax=CG_Solirubrobact_01
carbon-monoxide dehydrogenase, catalytic subunit (EC:1.2.99.2)
Carbon-monoxide dehydrogenase, catalytic subunit id=4543690 bin=GWC2_Syntrophus__56_31 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
cg_3.0_sub10_scaffold_34_c_27
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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30387..32594
-----------------
DNA (2208bp)
protein (736aa)
bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta (EC:2.3.1.169); K14138 carbon monoxide dehydrogenase / acetyl-CoA synthase subunit alpha [EC:1.2.7.4 1.2.99.2 2.3.1.169] Tax=C
bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta (EC:2.3.1.169)
CO dehydrogenase/acetyl-CoA synthase complex, beta subunit n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SM93_9DELT
cg_3.0_sub10_scaffold_34_c_28
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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32635..33987
-----------------
DNA (1353bp)
protein (451aa)
acetyl-CoA decarbonylase/synthase complex subunit gamma; K00197 acetyl-CoA decarbonylase/synthase complex subunit gamma [EC:2.1.1.-] Tax=CG_Solirubrobact_01
CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SM79_9DELT
acetyl-CoA decarbonylase/synthase complex subunit gamma
cg_3.0_sub10_scaffold_34_c_29
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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34078..36192
-----------------
DNA (2115bp)
protein (705aa)
glutamate synthase (EC:1.4.1.13) Tax=CG_Solirubrobact_01
glutamate synthase (EC:1.4.1.13)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase id=4039009 bin=GWC2_Nitrospirae_57_13 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
cg_3.0_sub10_scaffold_34_c_30
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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36339..36989
-----------------
DNA (651bp)
protein (217aa)
Uncharacterized protein n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LFS1_THEPS
hypothetical protein Tax=CG_Solirubrobact_01
hypothetical protein
Displaying items 1-30 of 31 in total

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