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cg_3.0_sub10_scaffold_209_c

Search features with annotation key words

Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_3.0_sub10_scaffold_209_c_1
CG_Maritim_01, Maritimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(111..536)
DNA (426bp) protein (142aa)
50S ribosomal protein L17 n=1 Tax=Polaribacter irgensii 23-P RepID=A4C2W3_9FLAO
rplQ; 50S ribosomal protein L17 Tax=CG_Maritim_01
rplQ; 50S ribosomal protein L17
cg_3.0_sub10_scaffold_209_c_2
CG_Maritim_01, Maritimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(623..1615)
DNA (993bp) protein (331aa)
rpoA; DNA-directed RNA polymerase, alpha subunit (EC:2.7.7.6) Tax=CG_Maritim_01
rpoA; DNA-directed RNA polymerase, alpha subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Polaribacter sp. MED152 RepID=A2U3A0_9FLAO
cg_3.0_sub10_scaffold_209_c_3
CG_Maritim_01, Maritimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(1629..2234)
DNA (606bp) protein (202aa)
30S ribosomal protein S4 n=1 Tax=Galbibacter marinus RepID=K2Q0Q3_9FLAO
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=CG_Maritim_01
30S ribosomal protein S4
cg_3.0_sub10_scaffold_209_c_4
CG_Maritim_01, Maritimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(2322..2705)
DNA (384bp) protein (128aa)
30S ribosomal protein S11 n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI0003808BFF
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=CG_Maritim_01
rpsK; 30S ribosomal protein S11
cg_3.0_sub10_scaffold_209_c_5
CG_Maritim_01, Maritimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(2714..3088)
DNA (375bp) protein (125aa)
30S ribosomal protein S13 n=2 Tax=Myroides RepID=H1ZB43_MYROD
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=CG_Maritim_01
rpsM; 30S ribosomal protein S13
cg_3.0_sub10_scaffold_209_c_6
CG_Maritim_01, Maritimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3219..3434)
DNA (216bp) protein (72aa)
Translation initiation factor IF-1 n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BYR5_9FLAO
bacterial translation initiation factor 1 (bif-1); K02518 translation initiation factor IF-1 Tax=CG_Maritim_01
infA; translation initiation factor IF-1
cg_3.0_sub10_scaffold_209_c_7
CG_Maritim_01, Maritimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(3434..4762)
DNA (1329bp) protein (443aa)
Protein translocase subunit SecY n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0M578_GRAFK
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=CG_Maritim_01
secY; preprotein translocase subunit SecY
cg_3.0_sub10_scaffold_209_c_8
CG_Maritim_01, Maritimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(4775..5224)
DNA (450bp) protein (150aa)
50S ribosomal protein L15 n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI0003684C33
putative 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=CG_Maritim_01
50S ribosomal protein L15
cg_3.0_sub10_scaffold_209_c_9
CG_Cyano_01, Cyanobacteria, Bacteria

Not on your lists


comp(5264..5806)
DNA (543bp) protein (181aa)
30S ribosomal protein S5 n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8G2W0_9CYAN
rpsE; 30S ribosomal protein S5 Tax=CG_Cyano_01
rpsE; 30S ribosomal protein S5
cg_3.0_sub10_scaffold_209_c_10
CG_Cyano_01, Cyanobacteria, Bacteria

Not on your lists


comp(5950..6312)
DNA (363bp) protein (121aa)
50S ribosomal protein L18 n=2 Tax=Arthrospira platensis RepID=D4ZPH6_ARTPN
rplR; 50S ribosomal protein L18 Tax=CG_Cyano_01
rplR; 50S ribosomal protein L18
cg_3.0_sub10_scaffold_209_c_11
CG_Cyano_01, Cyanobacteria, Bacteria

Not on your lists


comp(6316..6864)
DNA (549bp) protein (183aa)
50S ribosomal protein L6 n=1 Tax=Lyngbya aestuarii BL J RepID=U7QJ31_9CYAN
rplF; 50S ribosomal protein L6 Tax=CG_Cyano_01
rplF; 50S ribosomal protein L6
cg_3.0_sub10_scaffold_209_c_12
CG_Cyano_01, Cyanobacteria, Bacteria

Not on your lists


comp(7005..7406)
DNA (402bp) protein (134aa)
30S ribosomal protein S8 n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VQK7_9CYAN
SSU ribosomal protein S8P Tax=CG_Cyano_01
SSU ribosomal protein S8P
cg_3.0_sub10_scaffold_209_c_13
CG_Cyano_01, Cyanobacteria, Bacteria

Not on your lists


comp(7425..7976)
DNA (552bp) protein (184aa)
50S ribosomal protein L5 n=3 Tax=Arthrospira RepID=K1W1H7_ARTPT
50S ribosomal protein L5 Tax=CG_Cyano_01
50S ribosomal protein L5
cg_3.0_sub10_scaffold_209_c_14
CG_Cyano_01, Cyanobacteria, Bacteria

Not on your lists


comp(8103..8456)
DNA (354bp) protein (118aa)
50S ribosomal protein L24 n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T835_9CYAN
50S ribosomal protein L24 Tax=CG_Cyano_01
50S ribosomal protein L24
cg_3.0_sub10_scaffold_209_c_15
CG_Cyano_01, Cyanobacteria, Bacteria

Not on your lists


comp(8456..8824)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Microcoleus vaginatus FGP-2 RepID=F5UME6_9CYAN
LSU ribosomal protein L14P Tax=CG_Cyano_01
LSU ribosomal protein L14P
cg_3.0_sub10_scaffold_209_c_16
CG_Cyano_01, Cyanobacteria, Bacteria

Not on your lists


comp(8863..9120)
DNA (258bp) protein (86aa)
30S ribosomal protein S17 n=2 Tax=Lyngbya RepID=A0YJT5_LYNSP
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=CG_Cyano_01
rpsQ; 30S ribosomal protein S17
cg_3.0_sub10_scaffold_209_c_17
CG_Cyano_01, Cyanobacteria, Bacteria

Not on your lists


comp(9201..9407)
DNA (207bp) protein (69aa)
50S ribosomal protein L29 n=2 Tax=Arthrospira platensis RepID=D4ZPG9_ARTPN
rpmC; 50S ribosomal protein L29 Tax=CG_Cyano_01
rpmC; 50S ribosomal protein L29
cg_3.0_sub10_scaffold_209_c_18
Planktothrix agardhii, Planktothrix, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


comp(9465..9890)
DNA (426bp) protein (142aa)
50S ribosomal protein L16 n=5 Tax=Arthrospira RepID=D4ZPG8_ARTPN
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=388467 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Planktothrix.;" sourc
rplP; 50S ribosomal protein L16
cg_3.0_sub10_scaffold_209_c_19
CG_Cyano_01, Cyanobacteria, Bacteria

Not on your lists


comp(9985..10713)
DNA (729bp) protein (243aa)
30S ribosomal protein S3 n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YJT8_LYNSP
rpsC; 30S ribosomal protein S3 Tax=CG_Cyano_01
rpsC; 30S ribosomal protein S3
cg_3.0_sub10_scaffold_209_c_20
Planktothrix agardhii, Planktothrix, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


comp(10785..11141)
DNA (357bp) protein (119aa)
50S ribosomal protein L22 n=2 Tax=Lyngbya RepID=A0YJT9_LYNSP
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=388467 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Planktothrix.;" sourc
50S ribosomal protein L22
cg_3.0_sub10_scaffold_209_c_21
Planktothrix agardhii, Planktothrix, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


comp(11206..11484)
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=1 Tax=Pseudanabaena sp. PCC 7367 RepID=K9SGW6_9CYAN
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=388467 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Planktothrix.;" source="Planktothrix agardhii NIVA-C
30S ribosomal protein S19
cg_3.0_sub10_scaffold_209_c_22
CG_Cyano_01, Cyanobacteria, Bacteria

Not on your lists


comp(11572..12435)
DNA (864bp) protein (288aa)
50S ribosomal protein L2 n=2 Tax=Arthrospira platensis RepID=D4ZPG4_ARTPN
rplB; 50S ribosomal protein L2 Tax=CG_Cyano_01
rplB; 50S ribosomal protein L2
cg_3.0_sub10_scaffold_209_c_23
CG_Cyano_01, Cyanobacteria, Bacteria

Not on your lists


comp(12557..12862)
DNA (306bp) protein (102aa)
50S ribosomal protein L23 n=1 Tax=Lyngbya aestuarii BL J RepID=U7QGQ8_9CYAN
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=CG_Cyano_01
rplW; 50S ribosomal protein L23
cg_3.0_sub10_scaffold_209_c_24
CG_Cyano_01, Cyanobacteria, Bacteria

Not on your lists


comp(12852..13490)
DNA (639bp) protein (213aa)
50S ribosomal protein L4 n=3 Tax=Arthrospira RepID=K1WD58_ARTPT
rplD; 50S ribosomal protein L4 Tax=CG_Cyano_01
rplD; 50S ribosomal protein L4
cg_3.0_sub10_scaffold_209_c_25
CG_Cyano_01, Cyanobacteria, Bacteria

Not on your lists


comp(13505..14194)
DNA (690bp) protein (230aa)
50S ribosomal protein L3 n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YJU4_LYNSP
rplC; 50S ribosomal protein L3 Tax=CG_Cyano_01
rplC; 50S ribosomal protein L3
cg_3.0_sub10_scaffold_209_c_26
unknown

Not on your lists

14477..14575
DNA (99bp) protein (33aa)

This feature has no annotations

cg_3.0_sub10_scaffold_209_c_27
CG_Cyano_01, Cyanobacteria, Bacteria

Not on your lists

14859..15335
DNA (477bp) protein (159aa)
NADH dehydrogenase I subunit N; K05585 NAD(P)H-quinone oxidoreductase subunit N [EC:1.6.5.3] Tax=CG_Cyano_01
NAD(P)H-quinone oxidoreductase subunit N n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YJU5_LYNSP
NADH dehydrogenase I subunit N
cg_3.0_sub10_scaffold_209_c_28
CG_Cyano_01, Cyanobacteria, Bacteria

Not on your lists

15475..16734
DNA (1260bp) protein (420aa)
4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YJU6_LYNSP
Fe-S cluster containing protein Tax=CG_Cyano_01
Fe-S cluster containing protein rbh
cg_3.0_sub10_scaffold_209_c_29
CG_Cyano_01, Cyanobacteria, Bacteria

Not on your lists

16798..18570
DNA (1773bp) protein (591aa)
Single-stranded nucleic acid binding R3H n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YJU7_LYNSP
Ycf45 protein Tax=CG_Cyano_01
Ycf45 protein
cg_3.0_sub10_scaffold_209_c_30
CG_Cyano_01, Cyanobacteria, Bacteria

Not on your lists

18758..19942
DNA (1185bp) protein (395aa)
Methyltransferase domain protein n=1 Tax=Lyngbya aestuarii BL J RepID=U7Q8I7_9CYAN
putative chemotaxis protein methyltransferase Tax=CG_Cyano_01
putative chemotaxis protein methyltransferase
Displaying 30 items

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