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cg2_3.0_scaffold_5235_c

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_5235_c_1
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..719)
DNA (717bp) protein (239aa)
Porin Gram-negative type n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RRJ4_ACCPU rbh
porin Tax=CG_Rhodocyc_01
porin
cg2_3.0_scaffold_5235_c_2
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1239..2354)
DNA (1116bp) protein (372aa)
proB; gamma-glutamyl kinase (EC:2.7.2.11); K00931 glutamate 5-kinase [EC:2.7.2.11] Tax=CG_Rhodocyc_01
proB; gamma-glutamyl kinase (EC:2.7.2.11)
gamma-glutamyl kinase n=1 Tax=Methyloversatilis universalis RepID=UPI00036190F4 rbh
cg2_3.0_scaffold_5235_c_3
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2338..3396)
DNA (1059bp) protein (353aa)
GTPase Obg n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=OBG_AROAE rbh
obgE; GTPase ObgE; K03979 GTP-binding protein Tax=CG_Rhodocyc_01
obgE; GTPase ObgE
cg2_3.0_scaffold_5235_c_4
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3485..3751)
DNA (267bp) protein (89aa)
50S ribosomal protein L27 n=1 Tax=Thiobacillus denitrificans RepID=UPI00036A448F rbh
50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 Tax=CG_Rhodocyc_01
rpmA; 50S ribosomal subunit protein L27
cg2_3.0_scaffold_5235_c_5
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3788..4099)
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X7P7_9BURK rbh
50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 Tax=CG_Rhodocyc_01
50S ribosomal protein L21
cg2_3.0_scaffold_5235_c_6
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4274..5242
DNA (969bp) protein (323aa)
ispB; octaprenyl-diphosphate synthase (EC:2.5.1.-); K02523 octaprenyl-diphosphate synthase [EC:2.5.1.90] Tax=CG_Rhodocyc_01
ispB; octaprenyl-diphosphate synthase (EC:2.5.1.-)
Octaprenyl-diphosphate synthase n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z5I8_9RHOO rbh
cg2_3.0_scaffold_5235_c_trna_1
unknown

Not on your lists

5306..5379
DNA (74bp)
transferRNA
cg2_3.0_scaffold_5235_c_7
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5411..5638
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIS7_9PROT rbh
hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_5235_c_8
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5664..7244
DNA (1581bp) protein (527aa)
Two-component sensor kinase n=1 Tax=Azoarcus sp. KH32C RepID=H0PUD6_9RHOO rbh
pilS; two-component sensor kinase Tax=CG_Rhodocyc_01
histidine kinase
cg2_3.0_scaffold_5235_c_9
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7241..8605
DNA (1365bp) protein (455aa)
chemotaxis protein CheY n=1 Tax=Methyloversatilis universalis RepID=UPI00036026C8 rbh
two component sigma-54 specific Fis family transcriptional regulator; K02667 two-component system, NtrC family, response regulator PilR Tax=CG_Rhodocyc_01
two component sigma-54 specific Fis family transcriptional regulator
cg2_3.0_scaffold_5235_c_10
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8632..9213
DNA (582bp) protein (194aa)
N-acetyl-anhydromuranmyl-L-alanine amidase n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QV92_RALPI rbh
N-acetyl-anhydromuranmyl-L-alanine amidase; K03806 AmpD protein Tax=CG_Rhodocyc_01
N-acetyl-anhydromuranmyl-L-alanine amidase
cg2_3.0_scaffold_5235_c_11
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9219..10460)
DNA (1242bp) protein (414aa)
Putative signal transduction protein containing EAL and modified HD-GYP domains n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJZ7_AZOSU rbh
putative signal transduction protein containing EAL and modified HD-GYP domains; K07181 putative signal transduction protein containing EAL and modified HD-GYP domains Tax=CG_Rhodocyc_01
putative signal transduction protein containing EAL and modified HD-GYP domains
cg2_3.0_scaffold_5235_c_12
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10762..12093
DNA (1332bp) protein (444aa)
ribonucleoside-diphosphate reductase (EC:1.17.4.1); K00526 ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] Tax=CG_Rhodocyc_01
ribonucleoside-diphosphate reductase (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLC5_9PROT rbh
cg2_3.0_scaffold_5235_c_13
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12197..12709)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Pseudomonas pyrrocinia RepID=UPI00038187B0 rbh
hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_5235_c_14
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13203..13928
DNA (726bp) protein (242aa)
Lytic transglycosylase, catalytic n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47A69_DECAR rbh
lytic transglycosylase, catalytic Tax=CG_Rhodocyc_01
lytic transglycosylase, catalytic
cg2_3.0_scaffold_5235_c_15
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13992..14438
DNA (447bp) protein (149aa)
hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein id=12497322 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein
cg2_3.0_scaffold_5235_c_16
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14446..15615)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GTM9_THISH rbh
hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_5235_c_17
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15787..18063
DNA (2277bp) protein (759aa)
malic enzyme n=1 Tax=Methyloversatilis universalis RepID=UPI000376D3E3 rbh
maeB; malic enzyme Tax=CG_Rhodocyc_01
maeB; malic enzyme
cg2_3.0_scaffold_5235_c_18
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18087..19328
DNA (1242bp) protein (414aa)
patatin n=1 Tax=Methyloversatilis universalis RepID=UPI00036AC8E2 rbh
Patatin; K07001 NTE family protein Tax=CG_Rhodocyc_01
Patatin
cg2_3.0_scaffold_5235_c_19
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19405..19875
DNA (471bp) protein (157aa)
peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; K07262 D-alanyl-D-alanine endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] Tax=CG_Rhodocyc_01
peptidase n=1 Tax=Methyloversatilis universalis RepID=UPI0003770A6F
hypothetical protein
Displaying 20 items

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