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cg2_3.0_scaffold_1117_c

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_1117_c_1
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1161)
DNA (1161bp) protein (387aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:R
Catalase-peroxidase n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SFY9_GALCS rbh
catalase/peroxidase HPI
cg2_3.0_scaffold_1117_c_2
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1276..2238
DNA (963bp) protein (321aa)
LysR family transcriptional regulator n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000378D793 rbh
hydrogen peroxide-inducible genes activator Tax=CG_Rhodocyc_01
hydrogen peroxide-inducible genes activator
cg2_3.0_scaffold_1117_c_trna_1
unknown

Not on your lists

comp(2514..2587)
DNA (74bp)
transferRNA
cg2_3.0_scaffold_1117_c_3
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2682..3839
DNA (1158bp) protein (386aa)
ubiquinone biosynthesis hydroxylase n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00037B2B77 rbh
UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase Tax=CG_Rhodocyc_01
ubiquinone biosynthesis hydroxylase
cg2_3.0_scaffold_1117_c_4
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3873..4553
DNA (681bp) protein (227aa)
dsbC; putative protein disulfide-isomerase (EC:5.3.4.1); K03981 thiol:disulfide interchange protein DsbC [EC:5.3.4.1] Tax=CG_Rhodocyc_01
dsbC; putative protein disulfide-isomerase (EC:5.3.4.1)
Uncharacterized protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K3D6_AZOSB rbh
cg2_3.0_scaffold_1117_c_5
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4570..5772)
DNA (1203bp) protein (401aa)
ammonium transporter Tax=CG_Rhodocyc_01
putative ammonium transporter id=12498319 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
ammonium transporter
cg2_3.0_scaffold_1117_c_6
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6029..7228)
DNA (1200bp) protein (400aa)
mltA; membrane-bound lytic murein transglycosylase A (EC:3.2.1.-); K08304 membrane-bound lytic murein transglycosylase A [EC:3.2.1.-] Tax=CG_Rhodocyc_01
mltA; membrane-bound lytic murein transglycosylase A (EC:3.2.1.-)
Membrane-bound lytic murein transglycosylase A n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P2L8_AROAE rbh
cg2_3.0_scaffold_1117_c_7
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7293..8153
DNA (861bp) protein (287aa)
ATPase AAA n=1 Tax=Azoarcus toluclasticus RepID=UPI0003684DF6 rbh
ATPase, AAA family protein Tax=CG_Rhodocyc_01
ATPase, AAA family protein
cg2_3.0_scaffold_1117_c_8
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8160..9353)
DNA (1194bp) protein (398aa)
CAIB/BAIF family protein; K07749 formyl-CoA transferase [EC:2.8.3.16] Tax=CG_Rhodocyc_01
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Burkholderia sp. SJ98 RepID=K8R273_9BURK rbh
coA-transferase III family protein
cg2_3.0_scaffold_1117_c_9
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9353..10171)
DNA (819bp) protein (273aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Burkholderia sp. RPE64 RepID=R4WR10_9BURK rbh
binding-protein-dependent transport systems inner membrane component Tax=CG_Rhodocyc_01
binding-protein-dependent transport systems inner membrane component
cg2_3.0_scaffold_1117_c_10
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10152..10976)
DNA (825bp) protein (275aa)
Sulfonate/nitrate/taurine transport system ATP-binding protein n=1 Tax=Burkholderia phenoliruptrix BR3459a RepID=K0DM93_9BURK rbh
sulfonate/nitrate/taurine transport system ATP-binding protein Tax=CG_Rhodocyc_01
sulfonate/nitrate/taurine transport system ATP-binding protein
cg2_3.0_scaffold_1117_c_11
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10973..11998)
DNA (1026bp) protein (342aa)
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI0003639AA4 rbh
signal peptide protein; K02051 NitT/TauT family transport system substrate-binding protein Tax=CG_Rhodocyc_01
signal peptide protein
cg2_3.0_scaffold_1117_c_12
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12045..12692)
DNA (648bp) protein (216aa)
3-isopropylmalate dehydratase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] Tax=CG_Rhodocyc_01
3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2FS45_9GAMM
cg2_3.0_scaffold_1117_c_13
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12699..14120)
DNA (1422bp) protein (474aa)
leuC; alpha-IPM isomerase; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=CG_Rhodocyc_01
isopropylmalate isomerase n=1 Tax=Cupriavidus sp. WS RepID=UPI000374E0F6 rbh
leuC; alpha-IPM isomerase
cg2_3.0_scaffold_1117_c_14
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14183..15124
DNA (942bp) protein (314aa)
hypothetical protein; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-] Tax=CG_Rhodocyc_01
NUDIX hydrolase n=1 Tax=Azoarcus toluclasticus RepID=UPI00037CA7FF rbh
DNA mismatch repair protein MutT
cg2_3.0_scaffold_1117_c_15
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15135..15338)
DNA (204bp) protein (68aa)
DNA gyrase inhibitor YacG n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YVY8_9RHOO rbh
yacG; zinc-binding protein YacG; K09862 hypothetical protein Tax=CG_Rhodocyc_01
yacG; zinc-binding protein YacG
cg2_3.0_scaffold_1117_c_16
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15353..16123)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI000369844B rbh
hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_1117_c_17
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16255..16476
DNA (222bp) protein (74aa)
Thiamine biosynthesis protein ThiS n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJJ2_AZOSU rbh
thiamine biosynthesis protein ThiS; K03154 sulfur carrier protein Tax=CG_Rhodocyc_01
thiS; thiamine biosynthesis protein ThiS
cg2_3.0_scaffold_1117_c_18
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16569..17354
DNA (786bp) protein (262aa)
thiazole synthase n=1 Tax=Azoarcus toluclasticus RepID=UPI0003730672 rbh
thiazole biosynthesis family protein; K03149 thiamine biosynthesis ThiG Tax=CG_Rhodocyc_01
thiazole synthase
cg2_3.0_scaffold_1117_c_19
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17306..19717)
DNA (2412bp) protein (804aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI0003806B65 rbh
diguanylate cyclase Tax=CG_Rhodocyc_01
diguanylate cyclase
cg2_3.0_scaffold_1117_c_20
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19765..20490
DNA (726bp) protein (242aa)
trmB; tRNA (guanine-N(7)-)-methyltransferase; K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] Tax=CG_Rhodocyc_01
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00037AF4B7 rbh
trmB; tRNA (guanine-N(7)-)-methyltransferase
cg2_3.0_scaffold_1117_c_21
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20447..21613)
DNA (1167bp) protein (389aa)
coproporphyrinogen III oxidase (EC:1.3.3.3); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] Tax=CG_Rhodocyc_01
coproporphyrinogen III oxidase (EC:1.3.3.3)
coproporphyrinogen III oxidase n=1 Tax=Azoarcus toluclasticus RepID=UPI000360F5EA rbh
cg2_3.0_scaffold_1117_c_22
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(21648..22247)
DNA (600bp) protein (200aa)
non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] Tax=CG_Rhodocyc_01
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00036857A6 rbh
non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family
cg2_3.0_scaffold_1117_c_23
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22254..22973)
DNA (720bp) protein (240aa)
rph; ribonuclease PH (EC:2.7.7.56); K00989 ribonuclease PH [EC:2.7.7.56] Tax=CG_Rhodocyc_01
rph; ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH n=1 Tax=Azoarcus sp. (strain BH72) RepID=RNPH_AZOSB rbh
cg2_3.0_scaffold_1117_c_24
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22979..23902)
DNA (924bp) protein (308aa)
Putative phosphoprotein phosphatase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1KCM2_AZOSB rbh
putative phosphoprotein phosphatase Tax=CG_Rhodocyc_01
putative phosphoprotein phosphatase
cg2_3.0_scaffold_1117_c_25
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23899..24840)
DNA (942bp) protein (314aa)
serine/threonine protein kinase; K00924 [EC:2.7.1.-] Tax=CG_Rhodocyc_01
Serine/threonine protein kinase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFA0_AZOSU rbh
serine/threonine protein kinase
cg2_3.0_scaffold_1117_c_26
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25008..25871
DNA (864bp) protein (288aa)
stress-induced protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000381F065 rbh
hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_1117_c_27
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26050..27351
DNA (1302bp) protein (434aa)
Phage integrase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W1B0_9GAMM rbh
Phage integrase Tax=CG_Rhodocyc_01
Phage integrase
Displaying 28 items

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