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cg2_3.0_scaffold_2887_c

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_2887_c_1
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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2..178
DNA (177bp) protein (59aa)
Cytochrome c n=1 Tax=Thauera sp. 27 RepID=N6XNY6_9RHOO
Cytochrome c' Tax=CG_Rhodocyc_01
cytS; cytochrome c'-beta
cg2_3.0_scaffold_2887_c_2
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(206..718)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DST0_9PROT rbh
hypothetical protein; K09950 hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_2887_c_3
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(742..2016)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LUP8_9BURK rbh
hypothetical protein; K02004 putative ABC transport system permease protein Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_2887_c_4
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2013..2786)
DNA (774bp) protein (258aa)
ABC transporter n=1 Tax=Thauera sp. 28 RepID=N6Z9V2_9RHOO rbh
ABC transporter; K02003 putative ABC transport system ATP-binding protein Tax=CG_Rhodocyc_01
ABC transporter
cg2_3.0_scaffold_2887_c_5
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2753..3649)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI0003620908 rbh
hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_2887_c_6
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3646..4008)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI0003620908
hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_2887_c_7
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4216..5553)
DNA (1338bp) protein (446aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000375D4CA rbh
response regulator receiver protein Tax=CG_Rhodocyc_01
acetoacetate metabolism regulatory protein AtoC
cg2_3.0_scaffold_2887_c_8
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5787..7457
DNA (1671bp) protein (557aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003762B0A rbh
histidine kinase Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_2887_c_9
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7624..8538)
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003715988 rbh
phosphate ABC transporter substrate-binding protein Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_2887_c_10
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8926..9573)
DNA (648bp) protein (216aa)
maleylacetoacetate isomerase; K01800 maleylacetoacetate isomerase [EC:5.2.1.2] Tax=CG_Rhodocyc_01
maleylacetoacetate isomerase n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI0003485DCD rbh
maleylacetoacetate isomerase
cg2_3.0_scaffold_2887_c_11
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9578..10594)
DNA (1017bp) protein (339aa)
Fumarylacetoacetate (FAA) hydrolase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RQ16_ACCPU rbh
fumarylacetoacetate (FAA) hydrolase Tax=CG_Rhodocyc_01
fumarylacetoacetate (FAA) hydrolase
cg2_3.0_scaffold_2887_c_12
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10659..11651)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=T0B0U1_9RHOO rbh
C4-dicarboxylate transport system C4-dicarboxylate-binding protein Tax=CG_Rhodocyc_01
TRAP-type C4-dicarboxylate transport system, periplasmic component
cg2_3.0_scaffold_2887_c_13
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11699..12976)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=T0AUA6_9RHOO rbh
TRAP dicarboxylate transporter large permease protein Tax=CG_Rhodocyc_01
TRAP-type C4-dicarboxylate transport system, large permease component
cg2_3.0_scaffold_2887_c_14
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12973..13599)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZGB3_9RHOO rbh
tripartite ATP-independent periplasmic transporter DctQ Tax=CG_Rhodocyc_01
TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter
cg2_3.0_scaffold_2887_c_15
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13654..14190)
DNA (537bp) protein (179aa)
glyoxalase-family protein (EC:4.4.1.5); K01759 lactoylglutathione lyase [EC:4.4.1.5] Tax=CG_Rhodocyc_01
glyoxalase-family protein (EC:4.4.1.5); K01759 lactoylglutathione lyase [EC:4.4.1.5] id=12552587 bin=BDI species=Azoarcus sp. genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
glyoxalase-family protein
cg2_3.0_scaffold_2887_c_16
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14353..15270
DNA (918bp) protein (306aa)
LysR family transcriptional regulator n=1 Tax=Thauera phenylacetica B4P RepID=N6YRS7_9RHOO rbh
LysR family transcriptional regulator Tax=CG_Rhodocyc_01
bacterial regulatory helix-turn-helix , lysR family protein
cg2_3.0_scaffold_2887_c_17
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15613..16002
DNA (390bp) protein (130aa)
camphor resistance protein CrcB n=1 Tax=Lamprocystis purpurea RepID=UPI00037615B1 rbh
camphor resistance protein CrcB; K06199 CrcB protein Tax=CG_Rhodocyc_01
Integral membrane protein possibly involved in chromosome condensation
cg2_3.0_scaffold_2887_c_18
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16013..16381
DNA (369bp) protein (123aa)
Protein containing DUF190 n=1 Tax=mine drainage metagenome RepID=T0ZZK9_9ZZZZ rbh
hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_2887_c_19
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16479..17606
DNA (1128bp) protein (376aa)
serine-pyruvate aminotransferase (EC:2.6.1.51) Tax=CG_Rhodocyc_01
serine-pyruvate aminotransferase (EC:2.6.1.51)
class V aminotransferase n=1 Tax=Azoarcus toluclasticus RepID=UPI000366CD8F rbh
cg2_3.0_scaffold_2887_c_20
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17610..19397)
DNA (1788bp) protein (596aa)
asparagine synthase (EC:6.3.5.4) Tax=CG_Rhodocyc_01
asparagine synthase (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAA1_9PROT rbh
cg2_3.0_scaffold_2887_c_21
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19559..22828
DNA (3270bp) protein (1090aa)
recC; exodeoxyribonuclease V gamma chain RecC (EC:3.1.11.5); K03583 exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] Tax=CG_Rhodocyc_01
recC; exodeoxyribonuclease V gamma chain RecC (EC:3.1.11.5)
Exodeoxyribonuclease V gamma chain RecC n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HVQ4_RUBGI rbh
cg2_3.0_scaffold_2887_c_22
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22812..26465
DNA (3654bp) protein (1218aa)
exodeoxyribonuclease V subunit beta; K03582 exodeoxyribonuclease V beta subunit [EC:3.1.11.5] Tax=CG_Rhodocyc_01
Exodeoxyribonuclease V, beta subunit n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RR22_ACCPU rbh
exodeoxyribonuclease V subunit beta
cg2_3.0_scaffold_2887_c_23
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26462..28315
DNA (1854bp) protein (618aa)
recD; exodeoxyribonuclease V subunit alpha (EC:3.1.11.5); K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] Tax=CG_Rhodocyc_01
recD; exodeoxyribonuclease V subunit alpha (EC:3.1.11.5)
Exodeoxyribonuclease V, alpha subunit n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q60AZ4_METCA rbh
cg2_3.0_scaffold_2887_c_24
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28306..29280)
DNA (975bp) protein (325aa)
DNA-binding protein n=1 Tax=Methyloversatilis universalis RepID=UPI000380A1F9 rbh
Helix-turn-helix type 11 domain-containing protein Tax=CG_Rhodocyc_01
Helix-turn-helix type 11 domain protein
cg2_3.0_scaffold_2887_c_25
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29363..29929)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI0003703BA9 rbh
YceI family protein Tax=CG_Rhodocyc_01
YceI family protein
cg2_3.0_scaffold_2887_c_26
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29959..30525)
DNA (567bp) protein (189aa)
YceI family protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SG62_GALCS rbh
hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_2887_c_27
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30522..31076)
DNA (555bp) protein (185aa)
Cytochrome b/b6 domain n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SG61_GALCS rbh
Cytochrome b/b6 domain; K12262 cytochrome b561 Tax=CG_Rhodocyc_01
Cytochrome b/b6 domain
cg2_3.0_scaffold_2887_c_28
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31073..31516)
DNA (444bp) protein (148aa)
MarR family transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI00035D1F59 rbh
putative Transcriptional Regulator, MarR family Tax=CG_Rhodocyc_01
marR family transcriptional regulator
cg2_3.0_scaffold_2887_c_29
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31690..32670
DNA (981bp) protein (327aa)
C4-dicarboxylate ABC transporter substrate-binding protein n=1 Tax=Curvibacter lanceolatus RepID=UPI000365E06E rbh
TRAP family transport system, substrate-binding transport protein Tax=CG_Rhodocyc_01
C4-dicarboxylate ABC transporter substrate-binding protein
cg2_3.0_scaffold_2887_c_30
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32722..33234
DNA (513bp) protein (171aa)
Putative inner membrane transport protein n=2 Tax=Bordetella bronchiseptica RepID=K4TEX1_BORBO rbh
inner membrane transport protein Tax=CG_Rhodocyc_01
inner membrane transport protein
Displaying items 1-30 of 33 in total

View Taxonomy