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cg2_3.0_scaffold_858_c

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_858_c_1
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..87)
DNA (87bp) protein (29aa)
hypothetical protein; K07491 putative transposase Tax=CG_Rhodocyc_01
cg2_3.0_scaffold_858_c_2
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(162..1058)
DNA (897bp) protein (299aa)
heterodisulfide reductase, B subunit (EC:1.8.98.1); K03389 heterodisulfide reductase subunit B [EC:1.8.98.1] Tax=CG_Rhodocyc_01
heterodisulfide reductase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037F5F55 rbh
hdrB; heterodisulfide reductase, B subunit
cg2_3.0_scaffold_858_c_3
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1071..1685)
DNA (615bp) protein (205aa)
Heterodisulfide reductase subunit C n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ACL9_9PROT rbh
hdrC; heterodisulfide reductase subunit C Tax=CG_Rhodocyc_01
hdrC; heterodisulfide reductase subunit C
cg2_3.0_scaffold_858_c_4
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1697..3919)
DNA (2223bp) protein (741aa)
hdrA; heterodisulfide reductase subunit A (EC:1.8.98.1) Tax=CG_Rhodocyc_01
hdrA; heterodisulfide reductase subunit A (EC:1.8.98.1)
heterodisulfide reductase n=1 Tax=Thiobacillus denitrificans RepID=UPI000377FC61 rbh
cg2_3.0_scaffold_858_c_5
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3919..5205)
DNA (1287bp) protein (429aa)
hdrA; heterodisulfide reductase subunit A (EC:1.8.98.1) Tax=CG_Rhodocyc_01
Heterodisulfide reductase subunit A n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAE0_9PROT rbh
hdrA; heterodisulfide reductase subunit A
cg2_3.0_scaffold_858_c_6
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5357..5866)
DNA (510bp) protein (170aa)
metallophosphoesterase n=1 Tax=Thioalkalivibrio RepID=UPI000373D1AE rbh
phosphodiesterase; K07095 Tax=CG_Rhodocyc_01
phosphodiesterase
cg2_3.0_scaffold_858_c_7
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5863..6060)
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000374DB92 rbh
hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_858_c_8
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6090..6443)
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FJT7_9GAMM rbh
hypothetical protein
Putative uncharacterized protein Tax=CG_Rhodocyc_01
cg2_3.0_scaffold_858_c_9
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6817..7047
DNA (231bp) protein (77aa)
SirA family protein; K04085 tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] Tax=CG_Rhodocyc_01
SirA family protein n=1 Tax=Thauera sp. 63 RepID=N6X4W5_9RHOO rbh
SirA family protein
cg2_3.0_scaffold_858_c_10
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7290..7904
DNA (615bp) protein (205aa)
hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein
Putative uncharacterized protein id=1357069 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
cg2_3.0_scaffold_858_c_11
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7938..9284
DNA (1347bp) protein (449aa)
long-chain fatty acid transport protein Tax=CG_Rhodocyc_01
putative long-chain fatty acid transport protein id=12497667 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
long-chain fatty acid transport protein
cg2_3.0_scaffold_858_c_12
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9411..9830)
DNA (420bp) protein (140aa)
hypothetical protein; K07133 Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_858_c_13
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9885..12677)
DNA (2793bp) protein (931aa)
valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=CG_Rhodocyc_01
valyl-tRNA synthase n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00037E7C1C rbh
valS; valyl-tRNA synthetase
cg2_3.0_scaffold_858_c_14
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12703..13500)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Agaricus bisporus var. bisporus (strain H97 / ATCC MYA-4626 / FGSC 10389) RepID=K9HTI4_AGABB rbh
hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_858_c_15
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13497..13925)
DNA (429bp) protein (143aa)
DNA polymerase III subunit chi; K02339 DNA polymerase III subunit chi [EC:2.7.7.7] Tax=CG_Rhodocyc_01
DNA polymerase III, chi subunit n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QM18_AZOSU rbh
DNA polymerase III subunit chi
cg2_3.0_scaffold_858_c_16
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13922..15412)
DNA (1491bp) protein (497aa)
leucyl aminopeptidase; K01255 leucyl aminopeptidase [EC:3.4.11.1] Tax=CG_Rhodocyc_01
Probable cytosol aminopeptidase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QM17_AZOSU rbh
leucyl aminopeptidase
cg2_3.0_scaffold_858_c_17
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15507..16586
DNA (1080bp) protein (360aa)
permease n=1 Tax=Methyloversatilis universalis RepID=UPI0003824E1E rbh
putative permease; K07091 lipopolysaccharide export system permease protein Tax=CG_Rhodocyc_01
putative permease
cg2_3.0_scaffold_858_c_18
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16604..17677
DNA (1074bp) protein (358aa)
permease n=1 Tax=Azoarcus toluclasticus RepID=UPI000370E0E5 rbh
lptG; lipopolysaccharide export system, permease YjgP/YjgQ family protein Tax=CG_Rhodocyc_01
putative permease
cg2_3.0_scaffold_858_c_19
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17762..19195)
DNA (1434bp) protein (478aa)
GAF sensor hybrid histidine kinase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GER9_GEOUR rbh
multi-sensor signal transduction histidine kinase Tax=CG_Rhodocyc_01
multi-sensor signal transduction histidine kinase
cg2_3.0_scaffold_858_c_20
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19232..20431)
DNA (1200bp) protein (400aa)
beta-ketoadipyl CoA thiolase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=CG_Rhodocyc_01
Acetyl-CoA acetyltransferase / Beta-ketoadipyl CoA thiolase (EC:2.3.1.9)
acetyl-CoA acetyltransferase n=1 Tax=Caldimonas manganoxidans RepID=UPI00036BD12D rbh
cg2_3.0_scaffold_858_c_21
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20437..20922)
DNA (486bp) protein (162aa)
phenylacetic acid degradation protein PaaD; K02614 acyl-CoA thioesterase [EC:3.1.2.-] Tax=CG_Rhodocyc_01
Phenylacetic acid degradation protein PaaD n=1 Tax=Thauera phenylacetica B4P RepID=N6ZRP3_9RHOO rbh
phenylacetic acid degradation protein PaaD
cg2_3.0_scaffold_858_c_22
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20919..21710)
DNA (792bp) protein (264aa)
paaG; enoyl-CoA hydratase involved in phenylacetate catabolism; K15866 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] Tax=CG_Rhodocyc_01
enoyl-CoA hydratase n=1 Tax=Arhodomonas aquaeolei RepID=UPI00035F98F5 rbh
phenylacetate degradation probable enoyl-CoA hydratase paaB
cg2_3.0_scaffold_858_c_23
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21791..22405
DNA (615bp) protein (205aa)
Phenylacetic acid degradation protein PaaY n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RTA0_ACCPU rbh
phenylacetic acid degradation protein PaaY; K08279 carnitine operon protein CaiE Tax=CG_Rhodocyc_01
phenylacetic acid degradation protein PaaY
cg2_3.0_scaffold_858_c_24
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22513..23679
DNA (1167bp) protein (389aa)
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GQU6_9GAMM rbh
succinyl-CoA synthetase subunit beta Tax=CG_Rhodocyc_01
succinyl-CoA synthetase subunit beta
cg2_3.0_scaffold_858_c_25
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23704..24591
DNA (888bp) protein (296aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GUY3_9GAMM rbh
succinyl-CoA synthetase subunit alpha Tax=CG_Rhodocyc_01
succinyl-CoA synthetase subunit alpha
cg2_3.0_scaffold_858_c_26
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24673..25371
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00036A6D2B rbh
YjbE family integral membrane protein Tax=CG_Rhodocyc_01
YjbE family integral membrane protein
cg2_3.0_scaffold_858_c_27
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25379..26332
DNA (954bp) protein (318aa)
ornithine cyclodeaminase n=1 Tax=Methyloversatilis universalis RepID=UPI00036C23A0 rbh
ocd-1; ornithine cyclodeaminase Tax=CG_Rhodocyc_01
ocd-1; ornithine cyclodeaminase
cg2_3.0_scaffold_858_c_28
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26531..29050
DNA (2520bp) protein (840aa)
protein kinase family protein; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=CG_Rhodocyc_01
serine/threonine protein kinase n=1 Tax=Methyloversatilis universalis RepID=UPI00035E9FE7 rbh
protein kinase family protein
cg2_3.0_scaffold_858_c_29
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29054..29875
DNA (822bp) protein (274aa)
serine/threonine protein phosphatase; K01090 protein phosphatase [EC:3.1.3.16] Tax=CG_Rhodocyc_01
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00037B03F8 rbh
serine/threonine protein phosphatase
cg2_3.0_scaffold_858_c_30
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29894..30400
DNA (507bp) protein (169aa)
signal peptide protein n=1 Tax=Methyloversatilis universalis RepID=UPI000371C845 rbh
FHA domain-containing protein Tax=CG_Rhodocyc_01
FHA domain-containing protein
Displaying 30 items

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