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cg2_3.0_scaffold_2282_c

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_2282_c_1
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..377)
DNA (375bp) protein (125aa)
type II secretory pathway, pseudopilin PulG; K10924 MSHA pilin protein MshA Tax=CG_Rhodocyc_01
type II secretory pathway, pseudopilin PulG; K10924 MSHA pilin protein MshA id=12495067 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
type II secretory pathway, pseudopilin PulG
cg2_3.0_scaffold_2282_c_2
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(602..1165)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ANM7_9PROT rbh
hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_2282_c_3
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1267..2496)
DNA (1230bp) protein (410aa)
Type II secretory pathway, component PulF n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMA2_AZOSU rbh
type II secretory pathway, component PulF; K12278 MSHA biogenesis protein MshG Tax=CG_Rhodocyc_01
type II secretory pathway, component PulF
cg2_3.0_scaffold_2282_c_4
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2510..4213)
DNA (1704bp) protein (568aa)
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMA1_AZOSU rbh
type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; K12276 MSHA biogenesis protein MshE Tax=CG_Rhodocyc_01
type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
cg2_3.0_scaffold_2282_c_5
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4225..5388)
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00037A0B7F rbh
hypothetical protein; K12284 MSHA biogenesis protein MshN Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_2282_c_6
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5404..6234)
DNA (831bp) protein (277aa)
Type II secretory pathway, component ExeA (Predicted ATPase) n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMB5_AZOSU rbh
type II secretory pathway protein ExeA; K12283 MSHA biogenesis protein MshM Tax=CG_Rhodocyc_01
type II secretory pathway protein ExeA
cg2_3.0_scaffold_2282_c_7
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6239..8008)
DNA (1770bp) protein (590aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E1A8EA rbh
mshL; mannose-sensitive hemagglutinin L; K12282 MSHA biogenesis protein MshL Tax=CG_Rhodocyc_01
type II and III secretion system secretin
cg2_3.0_scaffold_2282_c_8
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8019..8423)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000374536D rbh
hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_2282_c_9
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8408..9100)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DNE2_9BURK rbh
putative mannose-sensitive agglutinin (MSHA) biogenesis protein MshJ Tax=CG_Rhodocyc_01
putative mannose-sensitive agglutinin (MSHA) biogenesis protein MshJ
cg2_3.0_scaffold_2282_c_10
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9097..9762)
DNA (666bp) protein (222aa)
Putative mannose-sensitive agglutinin (MSHA) n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CNC4_SIDLE rbh
mannose-sensitive agglutinin (MSHA) Tax=CG_Rhodocyc_01
mannose-sensitive agglutinin (MSHA)
cg2_3.0_scaffold_2282_c_11
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9759..10700)
DNA (942bp) protein (314aa)
Mannose-sensitive agglutinin (MSHA) biogenesis protein MshI n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AB22_9PROT rbh
mannose-sensitive agglutinin (MSHA) biogenesis protein MshI Tax=CG_Rhodocyc_01
mannose-sensitive agglutinin (MSHA) biogenesis protein MshI
cg2_3.0_scaffold_2282_c_12
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10962..12146)
DNA (1185bp) protein (395aa)
Twin-arginine translocation pathway signal sequence domain protein n=1 Tax=Burkholderia pseudomallei S13 RepID=B1HK20_BURPE rbh
twin-arginine translocation pathway signal sequence domain-containing protein Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_2282_c_13
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12151..13593)
DNA (1443bp) protein (481aa)
Putative signal peptide protein n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1W038_9BURK rbh
hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_2282_c_14
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13868..14401
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ACY4_9PROT rbh
hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_2282_c_trna_1
unknown

Not on your lists

comp(14499..14571)
DNA (73bp)
transferRNA
cg2_3.0_scaffold_2282_c_15
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14615..16057)
DNA (1443bp) protein (481aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] Tax=CG_Rhodocyc_01
Putative uncharacterized protein id=1334562 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
hypothetical protein
cg2_3.0_scaffold_2282_c_16
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16054..16500)
DNA (447bp) protein (149aa)
hypothetical protein Tax=CG_Rhodocyc_01
Putative tRNA nucleotidyltransferase/poly(A) polymerase id=1334561 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
hypothetical protein
cg2_3.0_scaffold_2282_c_17
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16539..19622)
DNA (3084bp) protein (1028aa)
DNA polymerase III subunit alpha (EC:2.7.7.7); K14162 error-prone DNA polymerase [EC:2.7.7.7] Tax=CG_Rhodocyc_01
DNA polymerase III subunit alpha (EC:2.7.7.7)
Error-prone DNA polymerase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SEZ8_THIDA rbh
Displaying 18 items

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