ggKbase home page

CG_SAG_2014_w16S_AYXOC_11_length_13168_cov_42.968_ID_7293

Search features with annotation key words

Displaying 19 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG_SAG_2014_w16S_AYXOC_11_length_13168_cov_42.968_ID_7293_1
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

2..481
DNA (480bp) protein (160aa)
Tax=CG_Roizman_01
CG_SAG_2014_w16S_AYXOC_11_length_13168_cov_42.968_ID_7293_2
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

503..1885
DNA (1383bp) protein (461aa)
hypothetical protein id=5090474 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
hypothetical protein
Tax=CG_Roizman_01
CG_SAG_2014_w16S_AYXOC_11_length_13168_cov_42.968_ID_7293_3
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(1878..2783)
DNA (906bp) protein (302aa)
id=5096251 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
Tax=CG_Roizman_01
CG_SAG_2014_w16S_AYXOC_11_length_13168_cov_42.968_ID_7293_4
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(2790..3080)
DNA (291bp) protein (97aa)
id=3432915 bin=GWC2_Elusimicrobia_51_8 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
Tax=CG_Roizman_01
CG_SAG_2014_w16S_AYXOC_11_length_13168_cov_42.968_ID_7293_5
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(3323..3499)
DNA (177bp) protein (59aa)
Tax=CG_Roizman_01
CG_SAG_2014_w16S_AYXOC_11_length_13168_cov_42.968_ID_7293_6
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(3505..3762)
DNA (258bp) protein (86aa)
PhdYeFM id=4516 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
Tax=CG_Roizman_01
CG_SAG_2014_w16S_AYXOC_11_length_13168_cov_42.968_ID_7293_7
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(3957..4568)
DNA (612bp) protein (204aa)
hypothetical protein id=3785976 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
Tax=CG_Roizman_01
CG_SAG_2014_w16S_AYXOC_11_length_13168_cov_42.968_ID_7293_8
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(4558..4791)
DNA (234bp) protein (78aa)
transmembrane_regions 41..63 id=3721 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
Tax=CG_Roizman_01
CG_SAG_2014_w16S_AYXOC_11_length_13168_cov_42.968_ID_7293_9
GWA2_OD1_31_28_partial, Parcubacteria, Bacteria

Not on your lists

comp(4971..5519)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E7I0_9BACT
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:KKP29282.1}; TaxID=1618806 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_31_28.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
CG_SAG_2014_w16S_AYXOC_11_length_13168_cov_42.968_ID_7293_10
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

5587..6462
DNA (876bp) protein (292aa)
Tax=CG_Roizman_01
CG_SAG_2014_w16S_AYXOC_11_length_13168_cov_42.968_ID_7293_11
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(6563..8332)
DNA (1770bp) protein (590aa)
coiled-coil 304..325 id=4785 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
Tax=CG_Roizman_01
CG_SAG_2014_w16S_AYXOC_11_length_13168_cov_42.968_ID_7293_12
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(8429..8656)
DNA (228bp) protein (76aa)
Tax=CG_Roizman_01
CG_SAG_2014_w16S_AYXOC_11_length_13168_cov_42.968_ID_7293_13
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(8646..8900)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FAK9_9BACT
hypothetical protein
Tax=CG_Roizman_01
CG_SAG_2014_w16S_AYXOC_11_length_13168_cov_42.968_ID_7293_14
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

9046..9543
DNA (498bp) protein (166aa)
Methicillin resistance protein n=1 Tax=uncultured bacterium RepID=K2FBJ0_9BACT
Tax=CG_Roizman_01
CG_SAG_2014_w16S_AYXOC_11_length_13168_cov_42.968_ID_7293_15
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

9527..10183
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037633C1
hypothetical protein
Tax=CG_Roizman_01
CG_SAG_2014_w16S_AYXOC_11_length_13168_cov_42.968_ID_7293_16
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(10380..10625)
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=candidate division OD1 bacterium SCGC AAA011-J16 RepID=UPI00035EA4B2
hypothetical protein
Tax=CG_Roizman_01
CG_SAG_2014_w16S_AYXOC_11_length_13168_cov_42.968_ID_7293_17
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(10898..11089)
DNA (192bp) protein (64aa)
hypothetical protein; K09799 hypothetical protein id=5044442 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
hypothetical protein
Tax=CG_Roizman_01
CG_SAG_2014_w16S_AYXOC_11_length_13168_cov_42.968_ID_7293_18
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(11122..11907)
DNA (786bp) protein (262aa)
ABC-2 type transporter id=1880510 bin=GWE2_CPR3_35_7 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=GWE2_CPR3_35_7 organism_group=CPR3 organism_desc=Good
ABC transporter
Tax=CG_Roizman_01
CG_SAG_2014_w16S_AYXOC_11_length_13168_cov_42.968_ID_7293_19
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(11904..12767)
DNA (864bp) protein (288aa)
ABC transporter related; K01990 ABC-2 type transport system ATP-binding protein id=51854 bin=ACD40 species=ACD40 genus=ACD40 taxon_order=ACD40 taxon_class=ACD40 phylum=OP11 tax=ACD40 organism_group=OP11 (Microgenomates) organism_desc=OP11
ybhF_2; ABC-type multidrug transport system ATPase component
Tax=CG_Roizman_01
Displaying 19 items

View Taxonomy