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CG_SAG_2014_w16S_AYXPP_10_length_18700_cov_44.3717_ID_754

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG_SAG_2014_w16S_AYXPP_10_length_18700_cov_44.3717_ID_754_1
RBG_13_Berkelbacteria_40_8_curated, Berkelbacteria, Bacteria

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3..2222
DNA (2220bp) protein (740aa)
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase id=4029024 bin=GWB1_Berkelbacteria_38_5 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria) rbh
Tax=RBG_13_Berkelbacteria_40_8_curated
CG_SAG_2014_w16S_AYXPP_10_length_18700_cov_44.3717_ID_754_2
GWE1_Berkelbacteria_39_12, Berkelbacteria, Bacteria

Not on your lists

2357..2929
DNA (573bp) protein (191aa)
Phage SPO1 DNA polymerase-related protein id=1263579 bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
phage SPO1 DNA polymerase-related protein
Tax=GWE1_Berkelbacteria_39_12
CG_SAG_2014_w16S_AYXPP_10_length_18700_cov_44.3717_ID_754_3

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2926..4611
DNA (1686bp) protein (562aa)
pth:PTH_1289 hydrolase; K12574 ribonuclease J [EC:3.1.-.-] id=86840 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD57039.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rnjA; ribonuclease J1 rbh
CG_SAG_2014_w16S_AYXPP_10_length_18700_cov_44.3717_ID_754_4
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

Not on your lists

4935..6974
DNA (2040bp) protein (680aa)
Cell divisionFtsK/SpoIIIE (Fragment) id=1263588 bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome rbh
Cell division FtsK/SpoIIIE {ECO:0000313|EMBL:KKQ17415.1}; TaxID=1618331 species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA1_36_9.;"
putative cell division FtsK/SpoIIIE
CG_SAG_2014_w16S_AYXPP_10_length_18700_cov_44.3717_ID_754_5
GWE1_Berkelbacteria_39_12, Berkelbacteria, Bacteria

Not on your lists

6981..7655
DNA (675bp) protein (225aa)
XRE family transcriptional regulator id=15189185 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
hypothetical protein
Tax=GWE1_Berkelbacteria_39_12
CG_SAG_2014_w16S_AYXPP_10_length_18700_cov_44.3717_ID_754_6
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

Not on your lists


7688..8692
DNA (1005bp) protein (335aa)
Protein RecA n=1 Tax=uncultured bacterium RepID=K2AJQ3_9BACT
Protein RecA {ECO:0000313|EMBL:KKQ17427.1}; TaxID=1618331 species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA1_36_9.;"
recA; Protein RecA
CG_SAG_2014_w16S_AYXPP_10_length_18700_cov_44.3717_ID_754_7
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

Not on your lists

8693..9163
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=euryarchaeote SCGC AAA261-E04 RepID=UPI00037AA44A
Regulatory protein RecX {ECO:0000313|EMBL:KKQ17432.1}; TaxID=1618331 species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA1_36_9.;"
regulatory protein RecX
CG_SAG_2014_w16S_AYXPP_10_length_18700_cov_44.3717_ID_754_8
GWE1_Berkelbacteria_39_12, Berkelbacteria, Bacteria

Not on your lists

9184..11493
DNA (2310bp) protein (770aa)
ppsA; phosphoenolpyruvate synthase/pyruvate phosphate dikinase; K01007 pyruvate, water dikinase [EC:2.7.9.2] id=15189188 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage) rbh
ppsA; phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Tax=GWE1_Berkelbacteria_39_12
CG_SAG_2014_w16S_AYXPP_10_length_18700_cov_44.3717_ID_754_9
unknown

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11831..12331
DNA (501bp) protein (167aa)

This feature has no annotations

CG_SAG_2014_w16S_AYXPP_10_length_18700_cov_44.3717_ID_754_trna_1
unknown

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12205..12291
DNA (87bp)
transferRNA Ser
CG_SAG_2014_w16S_AYXPP_10_length_18700_cov_44.3717_ID_754_10
GWA1_OD1_36_12, Parcubacteria, Bacteria

Not on your lists

12335..14149
DNA (1815bp) protein (605aa)
Primase protein {ECO:0000313|EMBL:KKP92607.1}; TaxID=1618782 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_36_12.;"
DNA primase id=1263618 bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
hypothetical protein
CG_SAG_2014_w16S_AYXPP_10_length_18700_cov_44.3717_ID_754_11
RBG_13_OP11_40_7b_curated, Microgenomates, Bacteria

Not on your lists

14124..15215
DNA (1092bp) protein (364aa)
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor id=15189199 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
RpoD subfamily RNA polymerase sigma-70 subunit
Tax=RBG_13_OP11_40_7b_curated
CG_SAG_2014_w16S_AYXPP_10_length_18700_cov_44.3717_ID_754_trna_2
unknown

Not on your lists

15239..15310
DNA (72bp)
transferRNA Asn
CG_SAG_2014_w16S_AYXPP_10_length_18700_cov_44.3717_ID_754_12
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

15569..16087
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) RepID=E0RR13_SPITD
hypothetical protein
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
CG_SAG_2014_w16S_AYXPP_10_length_18700_cov_44.3717_ID_754_13
CG_CPR16-01, CG_CPR16, Bacteria

Not on your lists

16089..16475
DNA (387bp) protein (129aa)
Two-component response regulator id=1889153 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=CG_CPR16-01
CG_SAG_2014_w16S_AYXPP_10_length_18700_cov_44.3717_ID_754_trna_3
unknown

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16488..16559
DNA (72bp)
transferRNA Glu
CG_SAG_2014_w16S_AYXPP_10_length_18700_cov_44.3717_ID_754_14
RBG_13_Berkelbacteria_40_8_curated, Berkelbacteria, Bacteria

Not on your lists

comp(16609..16980)
DNA (372bp) protein (124aa)
Response regulator receiver protein id=3442604 bin=GWB1_Berkelbacteria_38_5 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
winged helix family two component transcriptional regulator
Tax=RBG_13_Berkelbacteria_40_8_curated
CG_SAG_2014_w16S_AYXPP_10_length_18700_cov_44.3717_ID_754_15
Berkelbacteria bacterium GW2011_GWB1_38_5, Berkelbacteria, Bacteria

Not on your lists

comp(17000..18250)
DNA (1251bp) protein (417aa)
Sensor protein resE id=3442606 bin=GWB1_Berkelbacteria_38_5 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria) rbh
Sensor protein resE {ECO:0000313|EMBL:KKQ72379.1}; Flags: Fragment;; TaxID=1618336 species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWB1_38_5.;"
GAF sensor signal transduction histidine kinase
Displaying 18 items

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