ggKbase home page

CG_SAG_2014_w16S_AYZHG_2_length_17404_cov_72.3562_ID_2326

Search features with annotation key words

Displaying 16 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG_SAG_2014_w16S_AYZHG_2_length_17404_cov_72.3562_ID_2326_1
unknown

Not on your lists

comp(1..60)
DNA (60bp) protein (20aa)

This feature has no annotations

CG_SAG_2014_w16S_AYZHG_2_length_17404_cov_72.3562_ID_2326_2

Not on your lists

comp(143..1021)
DNA (879bp) protein (293aa)
dihydropteroate synthase n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B3086A rbh
Marine sediment metagenome DNA, contig: S12H4_S07481 {ECO:0000313|EMBL:GAI92943.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
dihydropteroate synthase DHPS rbh
CG_SAG_2014_w16S_AYZHG_2_length_17404_cov_72.3562_ID_2326_3

Not on your lists

comp(1035..2378)
DNA (1344bp) protein (448aa)
cdhE; acetyl-CoA decarbonylase / synthase complex subunit gamma (EC:2.1.1.245)
Marine sediment metagenome DNA, contig: S12H4_C01624 {ECO:0000313|EMBL:GAI61797.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative corrinoid/iron-sulfur protein, large subunit id=4543592 bin=GWC2_Syntrophus__56_31 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
CG_SAG_2014_w16S_AYZHG_2_length_17404_cov_72.3562_ID_2326_4
RBG_13_Chloroflexi_46_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(2395..4599)
DNA (2205bp) protein (735aa)
acetyl-CoA decarbonylase/synthase beta subunit (EC:2.3.1.169) rbh
Acetyl-CoA decarbonylase/synthase beta subunit n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C086_DESTA rbh
Tax=RBG_13_Chloroflexi_46_14_curated
CG_SAG_2014_w16S_AYZHG_2_length_17404_cov_72.3562_ID_2326_5
RBG_13_Chloroflexi_46_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(4856..6823)
DNA (1968bp) protein (656aa)
cdhA; CO dehydrogenase, catalytic subunit CdhA (EC:1.2.99.2) rbh
Carbon-monoxide dehydrogenase, catalytic subunit id=4543690 bin=GWC2_Syntrophus__56_31 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good + rbh
Tax=RBG_13_Chloroflexi_46_14_curated
CG_SAG_2014_w16S_AYZHG_2_length_17404_cov_72.3562_ID_2326_6

Not on your lists

comp(6847..7794)
DNA (948bp) protein (316aa)
cdhD; acetyl-CoA decarbonylase / synthase complex subunit delta (EC:2.1.1.245)
Marine sediment metagenome DNA, contig: S03H2_L00116 {ECO:0000313|EMBL:GAH27874.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Carbon-monoxide dehydrogenase delta subunit id=4543691 bin=GWC2_Syntrophus__56_31 species=unknown genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good + rbh
CG_SAG_2014_w16S_AYZHG_2_length_17404_cov_72.3562_ID_2326_7

Not on your lists

comp(7807..8025)
DNA (219bp) protein (73aa)
Marine sediment metagenome DNA, contig: S12H4_S13630 {ECO:0000313|EMBL:GAJ08326.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
CG_SAG_2014_w16S_AYZHG_2_length_17404_cov_72.3562_ID_2326_8
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

Not on your lists

comp(8042..8929)
DNA (888bp) protein (296aa)
Methylenetetrahydrofolate dehydrogenase (NADP(+)) (EC:1.5.1.5) rbh
Bifunctional protein FolD id=4741271 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good + rbh
Tax=RBG_13_Chloroflexi_56_8b_curated
CG_SAG_2014_w16S_AYZHG_2_length_17404_cov_72.3562_ID_2326_9
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

Not on your lists

comp(8974..9729)
DNA (756bp) protein (252aa)
Carbon monoxide dehydrogenase nickel-insertion accessory protein n=1 Tax=Dehalococcoides sp. (strain VS) RepID=D2BHF6_DEHSV
carbon monoxide dehydrogenase
Tax=RBG_13_Chloroflexi_56_8b_curated
CG_SAG_2014_w16S_AYZHG_2_length_17404_cov_72.3562_ID_2326_10

Not on your lists

comp(9726..11696)
DNA (1971bp) protein (657aa)
Ferredoxin n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NEV5_DESAR rbh
Marine sediment metagenome DNA, contig: S12H4_C00428 {ECO:0000313|EMBL:GAI64371.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ferredoxin rbh
CG_SAG_2014_w16S_AYZHG_2_length_17404_cov_72.3562_ID_2326_11

Not on your lists

comp(11733..13496)
DNA (1764bp) protein (588aa)
sfu:Sfum_2687 formate--tetrahydrofolate ligase (EC:6.3.4.3); K01938 formate--tetrahydrofolate ligase [EC:6.3.4.3] id=1241844 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi rbh
Marine sediment metagenome DNA, contig: S12H4_C00815 {ECO:0000313|EMBL:GAI69856.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
formate--tetrahydrofolate ligase rbh
CG_SAG_2014_w16S_AYZHG_2_length_17404_cov_72.3562_ID_2326_12
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(13548..14333)
DNA (786bp) protein (262aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Desulfobacca acetoxidans DSM 11109 RepID=F2NI47_DESAR id=1241846 bin=RBG2 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG2 organism_group=Chloroflexi rbh
cobyrinic acid ac-diamide synthase rbh
Tax=RBG_16_Chloroflexi_50_9_curated
CG_SAG_2014_w16S_AYZHG_2_length_17404_cov_72.3562_ID_2326_13
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14667..15320)
DNA (654bp) protein (218aa)
Transposase, IS5 family n=1 Tax=Caulobacter sp. AP07 RepID=J2FZD9_9CAUL
transposase IS4 family protein
Tax=RBG_13_Deltaproteobacteria_58_19_curated
CG_SAG_2014_w16S_AYZHG_2_length_17404_cov_72.3562_ID_2326_14
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(15363..15701)
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TM44_ALKMQ
hypothetical protein
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
CG_SAG_2014_w16S_AYZHG_2_length_17404_cov_72.3562_ID_2326_15

Not on your lists

comp(15772..16548)
DNA (777bp) protein (259aa)
Putative formate transporter n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z1A8_METPS rbh
Marine sediment metagenome DNA, contig: S01H4_L01761 {ECO:0000313|EMBL:GAG58980.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
fdhC; putative formate transporter rbh
CG_SAG_2014_w16S_AYZHG_2_length_17404_cov_72.3562_ID_2326_16

Not on your lists

comp(16570..16806)
DNA (237bp) protein (79aa)
Marine sediment metagenome DNA, contig: S12H4_L05277 {ECO:0000313|EMBL:GAI85536.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Displaying 16 items

View Taxonomy