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cn_combo_scaffold_17616

Alias: CNBR_UNK_10

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_17616_1
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2..274
DNA (273bp) protein (91aa)
50S ribosomal protein L20 n=1 Tax=Acidovorax radicis RepID=UPI0002377166
ribosomal protein l20; K02887 large subunit ribosomal protein L20 Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
rplT; 50S ribosomal protein L20
cn_combo_scaffold_17616_2
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


386..1438
DNA (1053bp) protein (351aa)
pheS; phenylalanyl-tRNA ligase subunit alpha (EC:6.1.1.20) Tax=GWA2_Burkholderiales_64_37_curated
pheS; phenylalanyl-tRNA ligase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Acidovorax sp. NO-1 RepID=H0BVD1_9BURK
cn_combo_scaffold_17616_3
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1564..3678
DNA (2115bp) protein (705aa)
pheT; phenylalanyl-tRNA ligase subunit beta (EC:6.1.1.20) Tax=GWA2_Burkholderiales_64_37_curated
pheT; phenylalanyl-tRNA ligase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0N1_9BURK
cn_combo_scaffold_17616_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3681..3965
DNA (285bp) protein (95aa)
pheT; phenylalanyl-tRNA ligase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
phenylalanyl-tRNA synthetase subunit beta n=1 Tax=Acidovorax radicis RepID=UPI0002377164
cn_combo_scaffold_17616_5
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4000..4122
DNA (123bp) protein (41aa)
integration host factor subunit alpha n=1 Tax=Acidovorax radicis RepID=UPI0002377163
ihfA; integration host factor subunit alpha
ihfA; integration host factor subunit alpha Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
cn_combo_scaffold_17616_6
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4419..4859
DNA (441bp) protein (147aa)
MerR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002377162
MerR family transcriptional regulator Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
MerR family transcriptional regulator
cn_combo_scaffold_17616_trna_1
unknown

Not on your lists

4890..4963
DNA (74bp)
transferRNA
cn_combo_scaffold_17616_7
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5134..5433
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002376DE1
hypothetical protein Tax=GWA2_Burkholderiales_64_37_curated
hypothetical protein
cn_combo_scaffold_17616_8
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5532..5735)
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002376DE0
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
hypothetical protein
cn_combo_scaffold_17616_9
unknown

Not on your lists

comp(5794..6381)
DNA (588bp) protein (196aa)

This feature has no annotations

cn_combo_scaffold_17616_10
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6599..7912)
DNA (1314bp) protein (438aa)
Cellobiohydrolase A n=1 Tax=Thauera sp. 27 RepID=N6XCC9_9RHOO
Cellobiohydrolase A {ECO:0000313|EMBL:ENO77080.1}; TaxID=305700 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
cn_combo_scaffold_17616_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8115..8828
DNA (714bp) protein (238aa)
nitrite reductase (NAD(P)H) large subunit (EC:1.7.1.4)
Nitrite reductase [NAD(P)H], large subunit n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WDU4_DELAC
Nitrite reductase [NAD(P)H], large subunit {ECO:0000313|EMBL:EPD34883.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delfti
cn_combo_scaffold_17616_12
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8866..9102)
DNA (237bp) protein (79aa)
transposase IS116/IS110/IS902 family protein; K07486 transposase id=12549922 bin=BDI species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
transposase IS116/IS110/IS902 family protein; K07486 transposase Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
transposase IS116/IS110/IS902 family protein
cn_combo_scaffold_17616_13
unknown

Not on your lists

comp(9279..9605)
DNA (327bp) protein (109aa)

This feature has no annotations

Displaying 14 items

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