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cn_combo_scaffold_1521

Alias: CNBR_UNK_53

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1521_1
unknown

Not on your lists

2..169
DNA (168bp) protein (56aa)

This feature has no annotations

cn_combo_scaffold_1521_2
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

315..2411
DNA (2097bp) protein (699aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002E29EB5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF48402.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
cn_combo_scaffold_1521_3
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2478..3137
DNA (660bp) protein (220aa)
Xylanase n=1 Tax=Brevibacillus panacihumi W25 RepID=V6M5M2_9BACL
Xylanase {ECO:0000313|EMBL:EST53602.1}; TaxID=1408254 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus panacihumi W25.;"
hypothetical protein
cn_combo_scaffold_1521_4
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3139..4278
DNA (1140bp) protein (380aa)
Glycosyl transferase group 1 n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LRG5_HALO1
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACY17193.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Halia
cn_combo_scaffold_1521_5
RIFOXYA2_FULL_Elusimicrobia_47_53_curated, Elusimicrobia, Bacteria

Not on your lists

comp(4341..5882)
DNA (1542bp) protein (514aa)
polysaccharide biosynthesis protein Tax=RIFOXYA2_FULL_Elusimicrobia_47_53_curated
Polysaccharide biosynthesis protein id=4955710 bin=GWC2_Planctomycete_KSU_39_26 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
hypothetical protein
cn_combo_scaffold_1521_6
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5889..6881)
DNA (993bp) protein (331aa)
Glycosyl transferase family 2 n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M2V4_GEODF
family 2 glycosyl transferase
Glycosyltransferase {ECO:0000313|EMBL:ACM21300.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (str
cn_combo_scaffold_1521_7
Leptolyngbya sp. Heron Island J, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(6878..7738)
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE12 RepID=UPI00037C26B7
Polysaccharide pyruvyl transferase
Succinoglycan biosynthesis ketolase {ECO:0000313|EMBL:ESA37696.1}; TaxID=1385935 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. Hero
cn_combo_scaffold_1521_8
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7826..9370)
DNA (1545bp) protein (515aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00036C8FC4
Uncharacterized protein {ECO:0000313|EMBL:KJV30419.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojue
hypothetical protein rbh
cn_combo_scaffold_1521_9
Desulfatitalea sp. BRH_c12, Desulfatitalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9383..10342)
DNA (960bp) protein (320aa)
Glycosyl transferase family 2 n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZWI7_DESOH
Glycosyl transferase {ECO:0000313|EMBL:KJS33598.1}; TaxID=1629708 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatitalea.;" source="Desulfatitale
glycosyl transferase family protein
cn_combo_scaffold_1521_10
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10377..12221)
DNA (1845bp) protein (615aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LK62_HALO1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY13096.1}; Flags: Precursor;; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;"
cn_combo_scaffold_1521_11
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12569..14089
DNA (1521bp) protein (507aa)
Polysaccharide biosynthesis protein id=1710562 bin=GWB2_Geobacter-like_52_12 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
polysaccharide biosynthesis protein Tax=GWB2_Geobacteraceae_52_12_curated
polysaccharide biosynthesis protein
cn_combo_scaffold_1521_12
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14157..15377)
DNA (1221bp) protein (407aa)
Putative uncharacterized protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K6U3_NITWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ28620.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni
cn_combo_scaffold_1521_13
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15504..16907)
DNA (1404bp) protein (468aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034A69F3
O-antigen polymerase
O-antigen polymerase {ECO:0000313|EMBL:AHX13669.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
cn_combo_scaffold_1521_14
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16904..17923)
DNA (1020bp) protein (340aa)
General secretion pathway protein-related protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P2D3_AROAE
general secretion pathway protein-related protein
General secretion pathway protein-related protein {ECO:0000313|EMBL:CAI08531.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source
cn_combo_scaffold_1521_15
unknown

Not on your lists

comp(17928..19544)
DNA (1617bp) protein (539aa)

This feature has no annotations

cn_combo_scaffold_1521_16
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19504..20469)
DNA (966bp) protein (322aa)
protein-tyrosine kinase n=1 Tax=Thiobacillus thioparus RepID=UPI0003650052
protein-tyrosine kinase Tax=RBG_16_Betaproteobacteria_58_11_curated
protein-tyrosine kinase
cn_combo_scaffold_1521_17
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20488..22062)
DNA (1575bp) protein (525aa)
Conserved hypothetical polysaccharide chain length determinant protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1KAP2_AZOSB
polysaccharide chain length determinant protein
Tax=BJP_08E140C01_Dechloromonas_61_78
cn_combo_scaffold_1521_18
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22098..22730)
DNA (633bp) protein (211aa)
Putative polysaccharide export protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P2D7_AROAE
wza; polysaccharide export protein
Tax=BJP_IG2103_Dechloromonas_63_51
cn_combo_scaffold_1521_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23117..24397
DNA (1281bp) protein (427aa)
UDP-glucose/GDP-mannose dehydrogenase; K02474 UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
UDP-glucose/GDP-mannose dehydrogenase id=1321831 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
UDP-glucose/GDP-mannose dehydrogenase
cn_combo_scaffold_1521_20

Not on your lists

24394..25437
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI000360197D
Vi polysaccharide biosynthesis protein TviC {ECO:0000313|EMBL:AEQ20402.1}; TaxID=1091566 species="Bacteria; environmental samples.;" source="uncultured bacterium CSL11.;"
nucleoside-diphosphate-sugar epimerase
cn_combo_scaffold_1521_21
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25445..28114)
DNA (2670bp) protein (890aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P971_AROAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI06138.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (
cn_combo_scaffold_1521_22
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28146..29501)
DNA (1356bp) protein (452aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=2 Tax=Thauera RepID=C4ZJH3_THASP
two component sigma-54 specific Fis family transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ACK54355.1}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae;
cn_combo_scaffold_1521_23
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29502..31595)
DNA (2094bp) protein (698aa)
multi-sensor signal transduction histidine kinase Tax=CG_Rhodocyc_01
Periplasmic Sensor Signal Transduction Histidine Kinase id=1302826 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
periplasmic sensor signal transduction histidine kinase
cn_combo_scaffold_1521_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31602..32975)
DNA (1374bp) protein (458aa)
undecaprenyl-phosphate galactosephosphotransferase (EC:2.7.8.6)
putative glycosyltransferase id=12495848 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
putative glycosyltransferase Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
cn_combo_scaffold_1521_25
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33193..33885)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFP4_AZOSU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV27157.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain AT
Displaying 25 items

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