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cn_combo_scaffold_2097

Alias: CNBR_UNK_54

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2097_1
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

606..1589
DNA (984bp) protein (328aa)
ABC-type phosphate transport system periplasmic protein; K02040 phosphate transport system substrate-binding protein id=12498550 bin=THIO_MID species=Herminiimonas arsenicoxydans genus=Herminiimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
ABC-type phosphate transport system periplasmic protein; K02040 phosphate transport system substrate-binding protein Tax=RBG_16_Betaproteobacteria_56_24_curated
ABC-type phosphate transport system periplasmic protein
cn_combo_scaffold_2097_2
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1658..2263
DNA (606bp) protein (202aa)
signal peptide id=12498549 bin=THIO_MID species=Herminiimonas arsenicoxydans genus=Herminiimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
signal peptide Tax=CG_Rhodocyc_01
signal peptide
cn_combo_scaffold_2097_3
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2387..4666
DNA (2280bp) protein (760aa)
ABC transporter permease; K02037 phosphate transport system permease protein id=12498548 bin=THIO_MID species=Herminiimonas arsenicoxydans genus=Herminiimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
ABC transporter permease; K02037 phosphate transport system permease protein Tax=CG_Rhodocyc_01
ABC transporter permease
cn_combo_scaffold_2097_4
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4678..6333
DNA (1656bp) protein (552aa)
membrane protein component of ABC phosphate transporter pstA-like; K02038 phosphate transport system permease protein id=12498547 bin=THIO_MID species=Herminiimonas arsenicoxydans genus=Herminiimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
membrane protein component of ABC phosphate transporter pstA-like; K02038 phosphate transport system permease protein Tax=CG_Rhodocyc_01
membrane protein component of ABC phosphate transporter pstA-like
cn_combo_scaffold_2097_5
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6377..7204
DNA (828bp) protein (276aa)
phosphate ABC transporter ATPase (EC:3.6.3.27); K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] id=12498546 bin=THIO_MID species=Methyloglobulus morosus genus=Methyloglobulus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
phosphate ABC transporter ATPase (EC:3.6.3.27); K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] Tax=CG_Rhodocyc_01
phosphate ABC transporter ATPase (EC:3.6.3.27)
cn_combo_scaffold_2097_6
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7225..8043
DNA (819bp) protein (273aa)
ompR1; Transcriptional regulatory protein ompR id=12498545 bin=THIO_MID species=Ideonella sp. B508-1 genus=Ideonella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
ompR5; Transcriptional regulatory protein ompR Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
ompR1; Transcriptional regulatory protein ompR
cn_combo_scaffold_2097_7
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8342..9217)
DNA (876bp) protein (292aa)
major facilitator superfamily protein id=12498544 bin=THIO_MID species=Acidithiobacillus ferrivorans genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEM47879.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;"
cn_combo_scaffold_2097_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9214..9789)
DNA (576bp) protein (192aa)
hypothetical protein id=12498543 bin=THIO_MID species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB85090.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
cn_combo_scaffold_2097_9
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(9841..10077)
DNA (237bp) protein (79aa)
thiol-disulfide isomerase/thioredoxin id=12498542 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
thiol-disulfide isomerase and thioredoxins family protein Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
thiol-disulfide isomerase/thioredoxin
cn_combo_scaffold_2097_10
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10119..10586)
DNA (468bp) protein (156aa)
hypothetical protein id=12498541 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN36862.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella deni
cn_combo_scaffold_2097_11
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10629..11048)
DNA (420bp) protein (140aa)
redox protein, regulator of disulfide bond formation id=12498540 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
redox protein, regulator of disulfide bond formation
Redox protein, regulator of disulfide bond formation {ECO:0000313|EMBL:BAN36890.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella
cn_combo_scaffold_2097_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11088..11384)
DNA (297bp) protein (99aa)
thiol-disulfide isomerase id=12498539 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
thiol-disulfide isomerase Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
thiol-disulfide isomerase and thioredoxins family protein
cn_combo_scaffold_2097_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11409..11696)
DNA (288bp) protein (96aa)
hypothetical protein id=12498538 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
cn_combo_scaffold_2097_14
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11714..11932)
DNA (219bp) protein (73aa)
hypothetical protein id=12498537 bin=THIO_MID species=Thiomicrospira arctica genus=Thiomicrospira taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=CG_Thiomicrospira_01
hypothetical protein
cn_combo_scaffold_2097_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11956..13011)
DNA (1056bp) protein (352aa)
permease; K07089 id=12498536 bin=THIO_MID species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
permease Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
permease
cn_combo_scaffold_2097_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13087..13620)
DNA (534bp) protein (178aa)
sigma-70 family RNA polymerase sigma factor id=12498535 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
sigma-70 family RNA polymerase sigma factor Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
sigma-70 family RNA polymerase sigma factor
cn_combo_scaffold_2097_17
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13679..15001)
DNA (1323bp) protein (441aa)
Fis family transcriptional regulator id=12498534 bin=THIO_MID species=Thioalkalivibrio sp. ALJ17 genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Fis family transcriptional regulator Tax=CG_Hydro_01
Fis family transcriptional regulator
cn_combo_scaffold_2097_18
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14991..16403)
DNA (1413bp) protein (471aa)
periplasmic sensor signal transduction histidine kinase id=12498533 bin=THIO_MID species=Thioalkalivibrio sp. ARh3 genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
periplasmic sensor signal transduction histidine kinase Tax=CG_Hydro_01
periplasmic sensor signal transduction histidine kinase
cn_combo_scaffold_2097_19
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16405..17268)
DNA (864bp) protein (288aa)
phosphonate-binding periplasmic protein; K02044 phosphonate transport system substrate-binding protein id=12498532 bin=THIO_MID species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
phosphonate ABC transporter periplasmic phosphonate-binding protein; K02044 phosphonate transport system substrate-binding protein Tax=CG_Hydro_01
phosphonate-binding periplasmic protein
cn_combo_scaffold_2097_20
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17443..17964
DNA (522bp) protein (174aa)
arsenite oxidase, small subunit (EC:1.20.98.1); K08355 arsenite oxidase small subunit [EC:1.20.9.1] id=12498531 bin=THIO_MID species=unknown genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
aoxA; arsenite oxidase small subunit (EC:1.20.98.1); K08355 arsenite oxidase small subunit [EC:1.20.9.1] Tax=CG_Hydro_01
arsenite oxidase, small subunit
cn_combo_scaffold_2097_21
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17979..20459
DNA (2481bp) protein (827aa)
aioA; arsenite oxidase subunit AioA (EC:1.20.98.1); K08356 arsenite oxidase large subunit [EC:1.20.9.1] id=12498530 bin=THIO_MID species=Herminiimonas arsenicoxydans genus=Herminiimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
aoxB; arsenite oxidase large subunit (EC:1.20.98.1); K08356 arsenite oxidase large subunit [EC:1.20.9.1] Tax=CG_Hydro_01
aioA; arsenite oxidase subunit AioA (EC:1.20.98.1)
cn_combo_scaffold_2097_22
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20823..21149
DNA (327bp) protein (109aa)
putative dissimilatory sulfite reductase id=12498529 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
putative dissimilatory sulfite reductase Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
dissimilatory sulfite reductase
cn_combo_scaffold_2097_23
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21561..24452)
DNA (2892bp) protein (964aa)
N6 adenine-specific DNA methyltransferase protein, N12 class id=12498528 bin=THIO_MID species=Thauera terpenica genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:EPZ16178.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
N6 adenine-specific DNA methyltransferase protein, N12 class
cn_combo_scaffold_2097_24
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24648..25625)
DNA (978bp) protein (326aa)
tyrosine recombinase XerD; K04763 integrase/recombinase XerD id=12498527 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
tyrosine recombinase XerD; K04763 integrase/recombinase XerD Tax=GWE1_Thiobacillus_62_9_curated
tyrosine recombinase XerD
cn_combo_scaffold_2097_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26016..26165
DNA (150bp) protein (50aa)
Uncharacterized protein id=1317122 bin=GWE1_T_denit_62_9 species=Legionella pneumophila genus=Legionella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
Displaying 25 items

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