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cn_combo_scaffold_12342

Alias: CNBR_UNK_67

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_12342_1
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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1..93
DNA (93bp) protein (31aa)
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Az
cn_combo_scaffold_12342_2
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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107..325
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3UHB0_ADVKW
Translation initiation factor 1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Ca
cn_combo_scaffold_12342_3
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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384..497
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNV6_AZOSU
50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.
cn_combo_scaffold_12342_4
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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514..879
DNA (366bp) protein (122aa)
30S ribosomal protein S13 n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2HXE1_9BURK
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus
30S ribosomal protein S13
cn_combo_scaffold_12342_5
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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921..1337
DNA (417bp) protein (139aa)
30S ribosomal protein S11 n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RYX0_9BURK
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirab
30S ribosomal protein S11
cn_combo_scaffold_12342_6
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1573..2196
DNA (624bp) protein (208aa)
30S ribosomal protein S4 n=3 Tax=Ralstonia solanacearum RepID=RS4_RALSO
30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannit
cn_combo_scaffold_12342_7
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2211..3209
DNA (999bp) protein (333aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase alpha subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Herbaspirillum sp. CF444 RepID=J3DLJ0_9BURK
cn_combo_scaffold_12342_8
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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3244..3636
DNA (393bp) protein (131aa)
50S ribosomal protein L17 n=1 Tax=Azoarcus sp. (strain BH72) RepID=RL17_AZOSB
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000255|HAMAP-Rule:MF_01368}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain
cn_combo_scaffold_12342_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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3818..4753
DNA (936bp) protein (312aa)
ABC transporter related protein n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z2N7_9NEIS
nodI; ABC transporter ATP-binding protein; K09695 lipooligosaccharide transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
nodI; nod factor export ATP-binding protein I
cn_combo_scaffold_12342_10
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4753..5181
DNA (429bp) protein (143aa)
nodulation protein NodJ n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0003135519
nodJ; ABC-2 type transport system permease; K09694 lipooligosaccharide transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
ABC-2 type transporter, NodJ family
Displaying 10 items

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