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cn_combo_scaffold_2113

Alias: CNBR_UNK_269

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2113_1
Medicago truncatula, Medicago, Fabales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(1..1131)
DNA (1131bp) protein (377aa)
Acyl coenzyme A dehydrogenase n=1 Tax=Roseobacter sp. GAI101 RepID=B7RI62_9RHOB
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KEH15547.1}; Uncharacterized protein {ECO:0000313|EnsemblPlants:KEH15547}; TaxID=3880 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyt
acyl-CoA dehydrogenase
cn_combo_scaffold_2113_2
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1147..1989)
DNA (843bp) protein (281aa)
branched-chain amino acid ABC transporter ATP-binding protein id=12553422 bin=BDI species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
branched-chain amino acid ABC transporter ATP-binding protein rbh
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
cn_combo_scaffold_2113_3
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1992..3239)
DNA (1248bp) protein (416aa)
ABC-type branched-chain amino acid transport systems, periplasmic component n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IBP0_BORPD
branched-chain amino acid ABC transporter periplasmic protein
ABC-type branched-chain amino acid transport systems, periplasmic component {ECO:0000313|EMBL:CAP41463.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcalige
cn_combo_scaffold_2113_4
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3268..4320)
DNA (1053bp) protein (351aa)
High-affinity branched-chain amino acid transport system permease protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IBN7_BORPD
high-affinity branched-chain amino acid transport system permease
High-affinity branched-chain amino acid transport system permease protein {ECO:0000313|EMBL:CAP41462.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligena
cn_combo_scaffold_2113_5
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4321..5205)
DNA (885bp) protein (295aa)
Branched-chain amino acid transport system permease protein livH n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IBN4_BORPD
branched-chain amino acid transport system permease livH rbh
Branched-chain amino acid transport system permease protein livH {ECO:0000313|EMBL:CAP41461.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bor
cn_combo_scaffold_2113_6
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5202..7169)
DNA (1968bp) protein (656aa)
lcf'; hypothetical protein id=12553425 bin=BDI species=Bradyrhizobium sp. DFCI-1 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
lcf'; hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
cn_combo_scaffold_2113_7
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7166..7993)
DNA (828bp) protein (276aa)
Putative high-affinity branched-chain amino acid transport ATP-binding protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IBM1_BORPD
high-affinity branched-chain amino acid transport ATP-binding protein rbh
Putative high-affinity branched-chain amino acid transport ATP-binding protein {ECO:0000313|EMBL:CAP41456.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcal
cn_combo_scaffold_2113_8
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8064..8834)
DNA (771bp) protein (257aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:CAP41455.1}; EC=1.1.1.35 {ECO:0000313|EMBL:CAP41455.1};; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcalige
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IBL9_BORPD
cn_combo_scaffold_2113_9
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8866..10104)
DNA (1239bp) protein (413aa)
Putative thiolase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IBL4_BORPD
thiolase rbh
Putative thiolase {ECO:0000313|EMBL:CAP41453.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain AT
cn_combo_scaffold_2113_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10229..11287)
DNA (1059bp) protein (353aa)
alpha-methylacyl-CoA racemase; K01796 alpha-methylacyl-CoA racemase [EC:5.1.99.4] id=12553429 bin=BDI species=Burkholderia cenocepacia genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
alpha-methylacyl-CoA racemase (EC:5.1.99.4)
Alpha-methylacyl-CoA racemase {ECO:0000313|EMBL:AEB84061.1}; EC=5.1.99.4 {ECO:0000313|EMBL:AEB84061.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonada
cn_combo_scaffold_2113_11
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11410..12192
DNA (783bp) protein (261aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase {ECO:0000313|EMBL:CAP41451.1}; EC=4.2.1.17 {ECO:0000313|EMBL:CAP41451.1};; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bord
Enoyl-CoA hydratase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IBK9_BORPD
cn_combo_scaffold_2113_12
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12179..13714)
DNA (1536bp) protein (512aa)
AMP-dependent synthetase and ligase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZI6_9BURK
AMP-dependent synthetase and ligase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
AMP-dependent synthetase and ligase
cn_combo_scaffold_2113_13
Pseudomonas sp. G5(2012), Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13734..14876)
DNA (1143bp) protein (381aa)
Acyl-CoA dehydrogenase n=1 Tax=Pseudomonas sp. G5(2012) RepID=S2FDV6_9PSED
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EPA95180.1}; TaxID=1268068 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. G5
acyl-CoA dehydrogenase
cn_combo_scaffold_2113_14
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15227..15928
DNA (702bp) protein (234aa)
Transcriptional regulator, TetR-family n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IBQ3_BORPD
TetR family transcriptional regulator
Transcriptional regulator, TetR-family {ECO:0000313|EMBL:CAP41468.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordete
cn_combo_scaffold_2113_15
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16095..17078)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6NA17_RHOPA
2-nitropropane dioxygenase {ECO:0000313|EMBL:EYS90417.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp.
hypothetical protein rbh
cn_combo_scaffold_2113_16
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17080..17508)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037F1C91
Uncharacterized protein {ECO:0000313|EMBL:KJV09881.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
osmotically inducible protein C
cn_combo_scaffold_2113_17
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17535..18152)
DNA (618bp) protein (206aa)
Transcriptional regulator, TetR-family n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IBQ3_BORPD
TetR family transcriptional regulator
TetR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
cn_combo_scaffold_2113_18
Salipiger mucosus, Salipiger, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18158..19438)
DNA (1281bp) protein (427aa)
TRAP-type C4-dicarboxylate transport system, large permease component n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9QRL1_9RHOB
TRAP-type C4-dicarboxylate transport system, large permease component {ECO:0000313|EMBL:EPX82273.1}; TaxID=1123237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobactera
TRAP dicarboxylate transporter subunit DctM
cn_combo_scaffold_2113_19
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19464..19991)
DNA (528bp) protein (176aa)
TRAP dicarboxylate transporter subunit DctQ n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N1R3_9RHIZ
TRAP dicarboxylate transporter subunit DctQ {ECO:0000313|EMBL:EKF18123.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" sour
cn_combo_scaffold_2113_20
Actibacterium atlanticum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20015..21052)
DNA (1038bp) protein (346aa)
TRAP dicarboxylate transporter-DctP subunit n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9RW71_9RHOB
Extracellular solute-binding protein {ECO:0000313|EMBL:KCV81339.1}; TaxID=1461693 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Ac
TRAP dicarboxylate transporter subunit DctP
cn_combo_scaffold_2113_21
Geobacillus stearothermophilus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21095..22657)
DNA (1563bp) protein (521aa)
acyl-CoA synthetase (EC:6.2.1.-)
AMP-dependent synthetase and ligase n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DTX3_9BACL
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EZP77056.1}; TaxID=1295642 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus stearothermophilus
cn_combo_scaffold_2113_22
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22686..23474)
DNA (789bp) protein (263aa)
enoyl-CoA hydratase/isomerase (EC:4.2.1.17)
Putative enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:CAP41465.1}; EC=4.2.1.17 {ECO:0000313|EMBL:CAP41465.1};; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; A
Putative enoyl-CoA hydratase/isomerase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IBP4_BORPD
cn_combo_scaffold_2113_23
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24088..24786)
DNA (699bp) protein (233aa)
Methionine biosynthesis protein MetW n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RZU4_9BURK
Methionine biosynthesis protein MetW {ECO:0000313|EMBL:EFV94093.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropi
methionine biosynthesis protein MetW
cn_combo_scaffold_2113_24
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24783..25937)
DNA (1155bp) protein (385aa)
Homoserine O-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.31 {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070942};; Homoserine O-trans-acety
Homoserine O-acetyltransferase n=1 Tax=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) RepID=METX_BURTA
homoserine O-acetyltransferase
Displaying 24 items

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