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cn_combo_scaffold_1752

Alias: CNBR_UNK_337

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1752_1
unknown

Not on your lists

93..326
DNA (234bp) protein (78aa)

This feature has no annotations

cn_combo_scaffold_1752_2
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(361..1149)
DNA (789bp) protein (263aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000313|EMBL:KGB54068.1}; EC=4.1.3.- {ECO:0000313|EMBL:KGB54068.1};; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphin
Imidazole glycerol phosphate synthase cyclase subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJH1_9BURK
imidazole glycerol phosphate synthase subunit HisF
cn_combo_scaffold_1752_3
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1152..1763)
DNA (612bp) protein (204aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJH0_9BURK
hisH; imidazole glycerol phosphate synthase subunit HisH
cn_combo_scaffold_1752_4
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1760..2914)
DNA (1155bp) protein (385aa)
LPS biosynthesis protein WbpG n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RIY3_ACCPU
N-acetyl sugar amidotransferase {ECO:0000313|EMBL:KGB54070.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphing
LPS biosynthesis protein WbpG
cn_combo_scaffold_1752_5
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3021..3941)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y134_SORCE
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:KGB54071.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sp
hypothetical protein
cn_combo_scaffold_1752_6
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3892..5112)
DNA (1221bp) protein (407aa)
Glycoside hydrolase n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1YUI0_9RHIZ
Group 1 glycosyl transferase {ECO:0000313|EMBL:KGB54072.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopy
group 1 glycosyl transferase
cn_combo_scaffold_1752_7
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5114..6220)
DNA (1107bp) protein (369aa)
CDP-glucose 4,6-dehydratase n=1 Tax=Pseudomonas extremaustralis RepID=UPI0002888C15
CDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:KGB54073.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyx
CDP-glucose 4,6-dehydratase
cn_combo_scaffold_1752_8
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6217..6996)
DNA (780bp) protein (260aa)
glucose-1-phosphate cytidylyltransferase (EC:2.7.7.33)
Glucose-1-phosphate cytidylyltransferase n=1 Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DP53_9FIRM
Glucose-1-phosphate cytidylyltransferase {ECO:0000313|EMBL:KGB54074.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" sourc
cn_combo_scaffold_1752_9
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7192..7890)
DNA (699bp) protein (233aa)
Methyltransferase, FkbM family {ECO:0000313|EMBL:KGB54075.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingo
FkbM family methyltransferase id=2896346 bin=GWF2_Lentisphaerae_50_93 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
FkbM family methyltransferase
cn_combo_scaffold_1752_10
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8059..9117
DNA (1059bp) protein (353aa)
UDP-N-acetylglucosamine C4 epimerase n=1 Tax=Burkholderia sp. RPE64 RepID=R4X197_9BURK
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:KGB54076.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sp
UDP-N-acetylglucosamine C4 epimerase rbh
cn_combo_scaffold_1752_11
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9136..10416)
DNA (1281bp) protein (427aa)
Protein CapL n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HQQ5_ACHXA
Vi polysaccharide biosynthesis protein vipA/tviB {ECO:0000313|EMBL:KGB54077.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.
UDP-N-acetyl-D-galactosamine dehydrogenase
cn_combo_scaffold_1752_12
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10686..11843
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI0002EDA195
Bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase {ECO:0000313|EMBL:KGB54078.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sp
C-methyltransferase
cn_combo_scaffold_1752_13
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11880..12734
DNA (855bp) protein (285aa)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Herbaspirillum sp. CF444 RepID=J2TRU2_9BURK
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:KGB54079.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphin
dTDP-4-dehydrorhamnose reductase
cn_combo_scaffold_1752_14
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12777..14258
DNA (1482bp) protein (494aa)
Uncharacterized protein n=1 Tax=Escherichia coli UMEA 3292-1 RepID=U0EHG4_ECOLX
Colanic acid exporter {ECO:0000313|EMBL:KGB54080.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp.
hypothetical protein
cn_combo_scaffold_1752_15
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14302..15462
DNA (1161bp) protein (387aa)
Glycosyltransferases involved in cell wall biogenesis n=2 Tax=Pseudomonas putida RepID=E4RDS4_PSEPB
Glycosyl transferase family protein {ECO:0000313|EMBL:KGB54081.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sp
Glycosyltransferases involved in cell wall biogenesis
cn_combo_scaffold_1752_16
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15722..16708
DNA (987bp) protein (329aa)
Glycosyltransferase KanE {ECO:0000313|EMBL:KGB54082.1}; EC=2.4.1.- {ECO:0000313|EMBL:KGB54082.1};; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
hypothetical protein n=1 Tax=Catenovulum agarivorans RepID=UPI00031A5A12
glycosyltransferase
cn_combo_scaffold_1752_17
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16705..18015
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WA83_ACISJ
Lipid A core-O-antigen ligase {ECO:0000313|EMBL:KGB54083.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingop
hypothetical protein
cn_combo_scaffold_1752_18
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18035..19204)
DNA (1170bp) protein (390aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000364A991
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:KGB54084.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="
cn_combo_scaffold_1752_19
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19201..20433)
DNA (1233bp) protein (411aa)
Predicted glycosyltransferase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WUD4_9BRAD
Glycosyl transferase {ECO:0000313|EMBL:KGB54085.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp.
group 1 glycosyl transferase
cn_combo_scaffold_1752_20
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20450..21598)
DNA (1149bp) protein (383aa)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:KGB54086.1}; EC=5.1.3.14 {ECO:0000313|EMBL:KGB54086.1};; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; S
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Rhodobacter sp. SW2 RepID=C8RWW0_9RHOB
cn_combo_scaffold_1752_21
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21595..22734)
DNA (1140bp) protein (380aa)
Capsular polysaccharide synthesis enzyme CapF n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TY41_9RHOB
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:KGB54087.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxi
NAD-dependent epimerase/dehydratase
cn_combo_scaffold_1752_22
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22731..23759)
DNA (1029bp) protein (343aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
Putative LPS biosynthesis related dehydratase n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TY42_9RHOB
Polysaccharide biosynthesis protein CapD {ECO:0000313|EMBL:KGB54088.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" sourc
cn_combo_scaffold_1752_23
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23947..24951)
DNA (1005bp) protein (335aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GSV6_SPHAL
NAD-dependent epimerase/dehydratase
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
cn_combo_scaffold_1752_24
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24956..25987)
DNA (1032bp) protein (344aa)
UDP-glucose 4-epimerase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USZ6_9SPHN
UDP-glucose 4-epimerase {ECO:0000313|EMBL:ENY81449.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
UDP-glucose 4-epimerase
cn_combo_scaffold_1752_25
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26100..27602
DNA (1503bp) protein (501aa)
UPF0061 protein EBMC1_10324 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WCF5_9SPHN
UPF0061 protein EBMC1_10324 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphing
hypothetical protein
cn_combo_scaffold_1752_26
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27749..30040
DNA (2292bp) protein (764aa)
Surface antigen (D15) n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WD79_9SPHN
Surface antigen (D15) {ECO:0000313|EMBL:KGB54091.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp.
surface antigen (D15)
cn_combo_scaffold_1752_27
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30088..34182
DNA (4095bp) protein (1365aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USJ0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KGB53656.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
cn_combo_scaffold_1752_28
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34182..34421
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USY9_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGB53655.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
cn_combo_scaffold_1752_29
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34599..35171
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WCF2_9SPHN
Membrane protein-like protein {ECO:0000313|EMBL:KGB54094.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingop
hypothetical protein
cn_combo_scaffold_1752_30
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35168..36184)
DNA (1017bp) protein (339aa)
UDP-galactose 4-epimerase {ECO:0000313|EMBL:ABF53272.1}; EC=5.1.3.2 {ECO:0000313|EMBL:ABF53272.1};; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
UDP-galactose 4-epimerase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GSV0_SPHAL
UDP-glucose 4-epimerase
Displaying items 1-30 of 33 in total

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