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cn_combo_scaffold_2528

Alias: CNBR_UNK_353b

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2528_1
unknown

Not on your lists

comp(1..429)
DNA (429bp) protein (143aa)

This feature has no annotations

cn_combo_scaffold_2528_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(437..1231)
DNA (795bp) protein (265aa)
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family id=1829182 bin=GWA2_Methylomirabilis_73_35 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
livF3; branched-chain amino acid ABC transporter ATP-binding proteim
cn_combo_scaffold_2528_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1276..2526)
DNA (1251bp) protein (417aa)
branched-chain amino acid ABC transporter periplasmic protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
ABC-type branched-chain amino acid transport system, periplasmic component id=1829180 bin=GWA2_Methylomirabilis_73_35 species=uncultured organism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter permease
cn_combo_scaffold_2528_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2555..3622)
DNA (1068bp) protein (356aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
ABC-type branched-chain amino acid transport system, permease component id=1829178 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
inner-membrane translocator
cn_combo_scaffold_2528_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3630..4526)
DNA (897bp) protein (299aa)
ABC transporter integral membrane subunit; K01997 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
Putative uncharacterized protein id=1829176 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anoxybacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
inner-membrane translocator
cn_combo_scaffold_2528_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4537..6477)
DNA (1941bp) protein (647aa)
fadD3; AMP-dependent synthetase and ligase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
AMP-dependent synthetase and ligase id=1829174 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
fadD3; AMP-dependent synthetase and ligase
cn_combo_scaffold_2528_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6474..7295)
DNA (822bp) protein (274aa)
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
ABC transporter related protein id=1829172 bin=GWA2_Methylomirabilis_73_35 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter
cn_combo_scaffold_2528_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7390..8244
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TVS8_9PROT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
cn_combo_scaffold_2528_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8250..9041)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U157_9PROT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
cn_combo_scaffold_2528_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9038..9919)
DNA (882bp) protein (294aa)
Phytanoyl-CoA dioxygenase family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TN19_9PROT
phytanoyl-CoA dioxygenase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
phytanoyl-CoA dioxygenase family protein
cn_combo_scaffold_2528_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9932..11110)
DNA (1179bp) protein (393aa)
Formyl-CoA transferase n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z583_9BRAD
formyl-CoA transferase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
formyl-CoA transferase
cn_combo_scaffold_2528_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11132..12193)
DNA (1062bp) protein (354aa)
ABC transporter; K02010 iron(III) transport system ATP-binding protein [EC:3.6.3.30] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
ABC transporter, ATP-binding protein id=4306927 bin=GWF2_Methylomirabilis_70_14 species=Acetobacteraceae bacterium AT-5844 genus=unknown taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Fe3/ABC transporter ATP-binding protein
cn_combo_scaffold_2528_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12190..13923)
DNA (1734bp) protein (578aa)
binding-protein-dependent transport systems inner membrane component; K02011 iron(III) transport system permease protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
ABC transporter, permease protein id=4306926 bin=GWF2_Methylomirabilis_70_14 species=Acetobacteraceae bacterium AT-5844 genus=unknown taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC Fe3+ siderophore transporter, inner membrane subunit
cn_combo_scaffold_2528_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13943..14962)
DNA (1020bp) protein (340aa)
family 1 extracellular solute-binding protein; K02012 iron(III) transport system substrate-binding protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Tat pathway signal sequence domain protein id=4306925 bin=GWF2_Methylomirabilis_70_14 species=Acetobacteraceae bacterium AT-5844 genus=unknown taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 1 extracellular solute-binding protein
cn_combo_scaffold_2528_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15057..15662
DNA (606bp) protein (202aa)
Methyltransferase type 12 n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XF97_9CHRO
Methyltransferase type 12 Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Methyltransferase type 12
cn_combo_scaffold_2528_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15732..17108
DNA (1377bp) protein (459aa)
MmgE/PrpD family protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AN97_DELSC
MmgE/PrpD family protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
MmgE/PrpD family protein
cn_combo_scaffold_2528_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17126..17611
DNA (486bp) protein (162aa)
MaoC family dehydratase n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2HZQ6_9BURK
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
cn_combo_scaffold_2528_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17615..18775
DNA (1161bp) protein (387aa)
butyryl-CoA dehydrogenase (EC:1.3.99.2) Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
butyryl-CoA dehydrogenase (EC:1.3.99.2)
Butyryl-CoA dehydrogenase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AN99_DELSC
cn_combo_scaffold_2528_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18775..19254
DNA (480bp) protein (160aa)
MaoC domain protein dehydratase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ANA0_DELSC
MaoC domain-containing protein dehydratase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
MaoC domain-containing protein dehydratase
cn_combo_scaffold_2528_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19251..20477
DNA (1227bp) protein (409aa)
fomryl-CoA transferase (EC:2.8.3.16) Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
fomryl-CoA transferase (EC:2.8.3.16)
Formyl-CoA transferase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ANA1_DELSC
cn_combo_scaffold_2528_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20488..21405
DNA (918bp) protein (306aa)
Malyl-CoA lyase (EC:4.1.3.24)
Citryl-CoA lyase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TSV9_TISMK
Citryl-CoA lyase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
cn_combo_scaffold_2528_22
bacterium YEK0313, Bacteria

Not on your lists

21416..21928
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI0003828BC2
Major Facilitator Superfamily protein {ECO:0000313|EMBL:CEJ10950.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
major facilitator transporter
Displaying 22 items

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