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cn_combo_scaffold_2530

Alias: CNBR_UNK_354b

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2530_1
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..310
DNA (309bp) protein (103aa)
peptide ABC transporter ATPase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003777590
Putative oligopeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:EAV41774.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenz
putative oligopeptide ABC transporter ATP-binding protein
cn_combo_scaffold_2530_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(437..1831)
DNA (1395bp) protein (465aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipi
putative two-component sensor histidine kinase (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NIT1_AFIFE
cn_combo_scaffold_2530_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1828..2583)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQ77_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28358.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
putative two-component response regulator
cn_combo_scaffold_2530_4
unknown

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2760..3380
DNA (621bp) protein (207aa)

This feature has no annotations

cn_combo_scaffold_2530_5
Pseudomonas sp. GM55, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3623..4411
DNA (789bp) protein (263aa)
Transcriptional regulator n=1 Tax=Pseudomonas sp. GM55 RepID=J3AZP6_9PSED
Transcriptional regulator {ECO:0000313|EMBL:EJM74863.1}; TaxID=1144333 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp.
hypothetical protein
cn_combo_scaffold_2530_6
Alcanivorax sp. PN-3, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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4404..5201
DNA (798bp) protein (266aa)
3-oxoacyl-ACP reductase n=1 Tax=Alcanivorax sp. PN-3 RepID=U7HUL9_9GAMM
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:ERS13768.1}; TaxID=1397526 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp.
short-chain dehydrogenase
cn_combo_scaffold_2530_7
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5286..6044)
DNA (759bp) protein (253aa)
3-hydroxy-2-methylbutyryl-CoA dehydrogenase n=1 Tax=Pseudomonas fluorescens NCIMB 11764 RepID=U7DLD7_PSEFL
3-hydroxy-2-methylbutyryl-CoA dehydrogenase {ECO:0000313|EMBL:KJR62986.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" sou
3-hydroxyacyl-CoA dehydrogenase
cn_combo_scaffold_2530_8
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6065..6763)
DNA (699bp) protein (233aa)
Nitroreductase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJF2_XANP2
nitroreductase
Nitroreductase {ECO:0000313|EMBL:ABS68145.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (st
cn_combo_scaffold_2530_9
Pseudomonas sp. GM55, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6888..8513)
DNA (1626bp) protein (542aa)
Acyl-CoA synthetase/AMP-acid ligase n=1 Tax=Pseudomonas sp. GM55 RepID=J3GTV2_9PSED
Acyl-CoA synthetase/AMP-acid ligase {ECO:0000313|EMBL:EJM74862.1}; TaxID=1144333 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseud
AMP-dependent synthetase
cn_combo_scaffold_2530_10
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8540..9727)
DNA (1188bp) protein (396aa)
Carnitine dehydratase n=1 Tax=Pseudomonas fluorescens NCIMB 11764 RepID=U7DFR0_PSEFL
Acyl-CoA hydratase {ECO:0000313|EMBL:KFE51757.1}; TaxID=317 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas syringae.;"
carnitine dehydratase
cn_combo_scaffold_2530_11
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9721..10494)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM55 RepID=J3GTQ5_9PSED
Short-chain dehydrogenase {ECO:0000313|EMBL:KFE51756.1}; TaxID=317 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas syringa
short-chain dehydrogenase/reductase sdr
cn_combo_scaffold_2530_12
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10491..11669)
DNA (1179bp) protein (393aa)
Acyl-CoA dehydrogenase n=1 Tax=Pseudomonas fluorescens NCIMB 11764 RepID=U7DUU7_PSEFL
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ERP45343.1}; TaxID=1221522 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluore
acyl-CoA dehydrogenase
cn_combo_scaffold_2530_13
Pseudomonas sp. GM55, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11681..12778)
DNA (1098bp) protein (366aa)
Putative aminoglycoside phosphotransferase n=1 Tax=Pseudomonas sp. GM55 RepID=J3AZP3_9PSED
Putative aminoglycoside phosphotransferase {ECO:0000313|EMBL:EJM74858.1}; TaxID=1144333 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source
hypothetical protein
cn_combo_scaffold_2530_14
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12991..14307
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CDX0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ41813.1}; Flags: Precursor;; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggi
branched-chain amino acid ABC transporter periplasmic protein
cn_combo_scaffold_2530_15

Not on your lists

14313..15155
DNA (843bp) protein (281aa)
High-affinity branched-chain amino acid transport ATP-binding protein livF (LIV-I protein F) n=1 Tax=mine drainage metagenome RepID=E6PNR0_9ZZZZ
High-affinity branched-chain amino acid transport ATP-binding protein livF (LIV-I protein F) {ECO:0000313|EMBL:CBH96562.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metage
putative ABC transporter ATP-binding protein
cn_combo_scaffold_2530_16
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15152..17269
DNA (2118bp) protein (706aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00035DDF67
ABC transporter {ECO:0000313|EMBL:EXL08720.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
ABC transporter-like protein
cn_combo_scaffold_2530_17
Laribacter hongkongensis, Laribacter, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17271..18161
DNA (891bp) protein (297aa)
ABC transporter permease protein n=1 Tax=Laribacter hongkongensis (strain HLHK9) RepID=C1DAM6_LARHH
ABC transporter permease
ABC transporter permease protein {ECO:0000313|EMBL:ACO73207.1}; TaxID=557598 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Laribacter.;" source="Laribacter h
cn_combo_scaffold_2530_18
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18165..19229
DNA (1065bp) protein (355aa)
ABC transporter permease n=1 Tax=Aquaspirillum serpens RepID=UPI0003B67876
Strain UM270 sctg_0108_0001, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ58917.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomon
ABC-type branched-chain amino acid transport system, permease component
cn_combo_scaffold_2530_19
Pseudomonas sp. BAY1663, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19257..20036
DNA (780bp) protein (260aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase/isomerase n=1 Tax=Pseudomonas stutzeri TS44 RepID=I4JMJ4_PSEST
Enoyl-CoA hydratase/isomerase FadB1x {ECO:0000313|EMBL:EXF43134.1}; TaxID=1439940 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseu
cn_combo_scaffold_2530_20
Sulfitobacter sp. CB2047, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20048..21223
DNA (1176bp) protein (392aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KFC28003.1}; EC=2.3.1.9 {ECO:0000313|EMBL:KFC28003.1};; TaxID=1525218 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacte
Acetyl-CoA acetyltransferase n=1 Tax=Citreicella sp. 357 RepID=I1ATG1_9RHOB
acetyl-CoA acetyltransferase
cn_combo_scaffold_2530_21
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21339..21692)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XSH2_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:EHH06889.1}; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Ag
hypothetical protein
Displaying 21 items

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