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cn_combo_scaffold_3155

Alias: CNBR_UNK_372

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_3155_1
unknown

Not on your lists

1..69
DNA (69bp) protein (23aa)

This feature has no annotations

cn_combo_scaffold_3155_2
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(285..785)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00036AEA9D
Scaffold8, whole genome shotgun sequence {ECO:0000313|EMBL:KIS31799.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
cn_combo_scaffold_3155_3
Glaciecola sp. 4H-3-7+YE-5, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(807..2492)
DNA (1686bp) protein (562aa)
hypothetical protein n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237B01A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE22843.1}; Flags: Precursor;; TaxID=983545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Glaciecola.;" source="
cn_combo_scaffold_3155_4
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

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comp(2489..4783)
DNA (2295bp) protein (765aa)
peptidase, s9b (dipeptidyl peptidase iv) subfamily protein n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237AD4A
ptpA; S9B family peptidase Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
ptpA; S9B family peptidase
cn_combo_scaffold_3155_5
Burkholderia lata, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4946..6304)
DNA (1359bp) protein (453aa)
Major facilitator superfamily (MFS_1) transporter n=1 Tax=Burkholderia sp. (strain 383) RepID=Q39HW8_BURS3
major facilitator transporter
Major facilitator superfamily (MFS_1) transporter {ECO:0000313|EMBL:ABB07948.1}; TaxID=482957 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Bu
cn_combo_scaffold_3155_6
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6438..8603
DNA (2166bp) protein (722aa)
TonB-dependent receptor n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SV26_CAUSK
TonB-dependent receptor rbh
TonB-dependent receptor {ECO:0000313|EMBL:ABZ71495.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source=
cn_combo_scaffold_3155_7
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8775..9455)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000373EFC8
Uncharacterized protein {ECO:0000313|EMBL:KGM34450.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limos
TetR family transcriptional regulator
cn_combo_scaffold_3155_8
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9622..10644)
DNA (1023bp) protein (341aa)
Zn-dependent dipeptidase, microsomal dipeptidase n=1 Tax=Novosphingobium sp. AP12 RepID=J2H5Z8_9SPHN
Zn-dependent dipeptidase, microsomal dipeptidase {ECO:0000313|EMBL:EJL30843.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobi
renal dipeptidase superfamily
cn_combo_scaffold_3155_9
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10852..12096
DNA (1245bp) protein (415aa)
sarcosine oxidase subunit beta; K00303 sarcosine oxidase, subunit beta [EC:1.5.3.1] Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
sarcosine oxidase subunit beta n=1 Tax=Hoeflea sp. 108 RepID=UPI0003608A2A
sarcosine oxidase subunit beta
cn_combo_scaffold_3155_10
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12107..12394
DNA (288bp) protein (96aa)
sarcosine oxidase subunit delta; K00304 sarcosine oxidase, subunit delta [EC:1.5.3.1] Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
soxD; sarcosine oxidase subunit delta (EC:1.5.3.1)
Sarcosine oxidase delta subunit n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XDR8_MICPN
cn_combo_scaffold_3155_11
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12391..15312
DNA (2922bp) protein (974aa)
glycine cleavage T protein (aminomethyl transferase); K00302 sarcosine oxidase, subunit alpha [EC:1.5.3.1] Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
Glycine cleavage T protein (Aminomethyl transferase) n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V4U4_SPHWW
glycine cleavage T protein (aminomethyl transferase)
cn_combo_scaffold_3155_12
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15305..15823
DNA (519bp) protein (173aa)
soxG; sarcosine oxidase gamma subunit (EC:1.5.3.1)
hypothetical protein, partial n=1 Tax=Nocardiopsis chromatogenes RepID=UPI000365814E
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
cn_combo_scaffold_3155_13
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15843..16706
DNA (864bp) protein (288aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=366602 species="Ba
Formyltetrahydrofolate deformylase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SV19_CAUSK
formyltetrahydrofolate deformylase rbh
cn_combo_scaffold_3155_14
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17024..17386)
DNA (363bp) protein (121aa)
Integrase, catalytic region n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJ89_9SPHN
transposase
Integrase, catalytic region {ECO:0000313|EMBL:EHJ58675.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosph
cn_combo_scaffold_3155_15
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17531..18085
DNA (555bp) protein (185aa)
transposase n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036AD6A3
Transposase {ECO:0000313|EMBL:AHE55989.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens
Transposase
Displaying 15 items

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