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cn_combo_scaffold_3459

Alias: CNBR_UNK_381

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_3459_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..532)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037A627E
ureD; urease accessory protein UreD Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
ureD; Urease accessory protein ureD
cn_combo_scaffold_3459_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

563..1114
DNA (552bp) protein (184aa)
Transcription elongation factor GreB n=39 Tax=Bordetella RepID=F4LG74_BORPC
greB; transcription elongation factor GreB; K04760 transcription elongation factor GreB Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
greB; transcription elongation factor
cn_combo_scaffold_3459_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1153..2457)
DNA (1305bp) protein (435aa)
pcaB; 3-carboxy-cis,cis-muconate cycloisomerase (EC:5.5.1.2); K01857 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
3-carboxy-cis,cis-muconate cycloisomerase (EC:5.5.1.2)
3-carboxy-cis,cis-muconate cycloisomerase n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46R63_CUPPJ
cn_combo_scaffold_3459_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2462..3025)
DNA (564bp) protein (188aa)
pcaG_1; protocatechuate 3,4-dioxygenase subunit alpha (EC:1.13.11.3); K00448 protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Protocatechuate 3,4-dioxygenase, alpha subunit n=2 Tax=Pseudomonas RepID=J2M2D3_9PSED
protocatechuate 3,4-dioxygenase
cn_combo_scaffold_3459_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3022..3618)
DNA (597bp) protein (199aa)
protocatechuate 3,4-dioxygenase subunit beta; K00449 protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
protocatechuate 3,4-dioxygenase subunit beta n=1 Tax=Pseudomonas mandelii RepID=UPI0003603E4B
protocatechuate 3,4-dioxygenase subunit beta
cn_combo_scaffold_3459_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3759..5303)
DNA (1545bp) protein (515aa)
Sulfatase n=1 Tax=Oceanibaculum indicum P24 RepID=K2IRT8_9PROT
putative sulfatase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
putative sulfatase
cn_combo_scaffold_3459_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5376..6407
DNA (1032bp) protein (344aa)
2-ketogluconate reductase (EC:1.1.1.215); K00090 gluconate 2-dehydrogenase [EC:1.1.1.215] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Blr7063 protein id=4911277 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
2-ketogluconate reductase
cn_combo_scaffold_3459_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6429..6614)
DNA (186bp) protein (62aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
cn_combo_scaffold_3459_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6645..7622)
DNA (978bp) protein (326aa)
hypothetical protein; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TZU9_9BRAD
hypothetical protein
cn_combo_scaffold_3459_10
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7750..9132)
DNA (1383bp) protein (461aa)
amidase (EC:3.5.1.4)
Amidase n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7Y5U4_9RHIZ
Amidase {ECO:0000313|EMBL:EMS42221.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum
cn_combo_scaffold_3459_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9129..9317)
DNA (189bp) protein (63aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
cn_combo_scaffold_3459_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9418..10950)
DNA (1533bp) protein (511aa)
alkaline phosphatase (EC:3.1.3.1)
alkaline phosphatase n=1 Tax=Variovorax paradoxus RepID=UPI0003729EFC
Variovorax paradoxus strain MEDvA23 contig_63, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ26009.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
cn_combo_scaffold_3459_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11037..11789
DNA (753bp) protein (251aa)
Short-chain dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JMB8_9PROT
short-chain dehydrogenase/reductase SDR Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
short-chain dehydrogenase
cn_combo_scaffold_3459_14
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11839..12933)
DNA (1095bp) protein (365aa)
lactate dehydrogenase n=1 Tax=Bradyrhizobium elkanii RepID=UPI000372A891
Lactate dehydrogenase {ECO:0000313|EMBL:KJC40743.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
putative FMN-dependent alpha-hydroxy acid dehydrogenase family protein
cn_combo_scaffold_3459_15
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13132..15036
DNA (1905bp) protein (635aa)
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TXK5_9PROT
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJB95836.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.
putative oligopeptide ABC transporter, periplasmic oligopeptide-binding protein
cn_combo_scaffold_3459_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15094..16623)
DNA (1530bp) protein (510aa)
Pyruvate carboxylase n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YAM0_9GAMM
carbamoyl-phosphate synthase L chain ATP-binding protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
carbamoyl-phosphate synthase L chain ATP-binding protein
Displaying 16 items

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