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cn_combo_scaffold_3766

Alias: CNBR_UNK_388

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_3766_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..172)
DNA (171bp) protein (57aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
cn_combo_scaffold_3766_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(182..508)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000365175A
major virion structural protein
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
cn_combo_scaffold_3766_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(505..1434)
DNA (930bp) protein (310aa)
Uncharacterized protein n=3 Tax=Azotobacter vinelandii RepID=M9Y4J8_AZOVI
putative virulence effector protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Virulence factor
cn_combo_scaffold_3766_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1531..2310)
DNA (780bp) protein (260aa)
hutD; hemin ABC transporter ATP-binding protein; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI00036EF5E7
ABC transporter
cn_combo_scaffold_3766_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2307..3356)
DNA (1050bp) protein (350aa)
Transport system permease protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CW19_TRURR
transport system permease; K02015 iron complex transport system permease protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
transport system permease
cn_combo_scaffold_3766_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3353..4216)
DNA (864bp) protein (288aa)
ABC transporter substrate-binding protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B7584B
hmuT; Hemin-binding periplasmic protein HmuT,putative; K02016 iron complex transport system substrate-binding protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
periplasmic-binding protein
cn_combo_scaffold_3766_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4216..5265)
DNA (1050bp) protein (350aa)
Hemin transport protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IY27_RHOCS
hmuS; hemin transport protein; K07225 putative hemin transport protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hmuS; hemin transport protein rbh
cn_combo_scaffold_3766_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5277..6113)
DNA (837bp) protein (279aa)
TonB family protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPH4_PARL1
TonB family protein; K03832 periplasmic protein TonB Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
TonB family protein
cn_combo_scaffold_3766_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6107..8407)
DNA (2301bp) protein (767aa)
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein (Fragment) n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RJF8_9PROT
TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; K02014 iron complex outermembrane recepter protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
TonB-dependent hemoglobin/transferrin/lactoferrin family receptor
cn_combo_scaffold_3766_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8514..8711)
DNA (198bp) protein (66aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
cn_combo_scaffold_3766_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8801..9298
DNA (498bp) protein (166aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
cn_combo_scaffold_3766_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9295..9552
DNA (258bp) protein (86aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
cn_combo_scaffold_3766_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9620..11515)
DNA (1896bp) protein (632aa)
Probable potassium transport system protein kup n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9YY86_9NEIS
K+ transporter Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
potassium uptake protein
cn_combo_scaffold_3766_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11619..12011
DNA (393bp) protein (131aa)
pcaC; 4-carboxymuconolactone decarboxylase (EC:4.1.1.44) Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
carboxymuconolactone decarboxylase; K01607 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] id=14625236 bin=bin7_NC10_sister species=Advenella kashmirensis genus=Advenella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
4-carboxymuconolactone decarboxylase
cn_combo_scaffold_3766_15
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12017..12934
DNA (918bp) protein (306aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};;
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13EU9_RHOPS
cn_combo_scaffold_3766_16
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12931..13761
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TKW6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP66315.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
methyltransferase type 11
cn_combo_scaffold_3766_17
unknown

Not on your lists

comp(13758..14027)
DNA (270bp) protein (90aa)

This feature has no annotations

cn_combo_scaffold_3766_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14080..14991)
DNA (912bp) protein (304aa)
Membrane protein n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2J0L1_9BURK
terC; membrane protein TerC Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
terC; membrane protein TerC
cn_combo_scaffold_3766_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15063..15410)
DNA (348bp) protein (116aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
cn_combo_scaffold_3766_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15492..15926)
DNA (435bp) protein (145aa)
actP; copper-transporting P-type ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Copper-translocating P-type ATPase n=1 Tax=Oceanibaculum indicum P24 RepID=K2IZA9_9PROT
copper-translocating P-type ATPase
Displaying 20 items

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