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cn_combo_scaffold_5248

Alias: CNBR_UNK_458

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_5248_1
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..1729
DNA (1728bp) protein (576aa)
Heavy metal efflux pump, cobalt-zinc-cadmium n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK09_9BURK
heavy metal efflux pump, cobalt-zinc-cadmium Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
heavy metal efflux pump, cobalt-zinc-cadmium
cn_combo_scaffold_5248_2
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1722..2024
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK08_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR70980.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacter
Protein of unknown function (DUF3240)
cn_combo_scaffold_5248_3
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2021..3262
DNA (1242bp) protein (414aa)
Outer membrane protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK07_9BURK
Type I secretion outer membrane protein, TolC family {ECO:0000313|EMBL:EWS56605.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methyli
outer membrane protein
cn_combo_scaffold_5248_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3438..4175
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA022 RepID=U8RDV4_PSEAI
Membrane protein {ECO:0000313|EMBL:ETD48020.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa V
hypothetical protein
cn_combo_scaffold_5248_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4198..4836
DNA (639bp) protein (213aa)
Uncharacterized protein n=15 Tax=Pseudomonas aeruginosa RepID=U1FJ24_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:ETD48021.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
transmembrane anchor protein
cn_combo_scaffold_5248_6
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4962..5222
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA011 RepID=U8WJA2_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:ETD48022.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
cn_combo_scaffold_5248_7
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5446..6354
DNA (909bp) protein (303aa)
Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=Q13VS7_BURXL
Transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CDM23710.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Ca
cn_combo_scaffold_5248_8
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6331..6594)
DNA (264bp) protein (88aa)
Transcriptional regulator, XRE family n=2 Tax=Burkholderiaceae RepID=Q13VS6_BURXL
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABE31813.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burk
cn_combo_scaffold_5248_9
unknown

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6698..6850
DNA (153bp) protein (51aa)

This feature has no annotations

cn_combo_scaffold_5248_10
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7013..8260)
DNA (1248bp) protein (416aa)
CzcA family heavy metal efflux pump n=2 Tax=Thauera aminoaromatica S2 RepID=N6Z3U7_9RHOO
Heavy metal efflux pump, CzcA family protein {ECO:0000313|EMBL:KIN89272.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thaue
CzcA family heavy metal efflux pump
cn_combo_scaffold_5248_11
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8390..8788)
DNA (399bp) protein (133aa)
Outer membrane efflux protein n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4K950_THASP
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ACR02561.1}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ
cn_combo_scaffold_5248_12
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8785..9099)
DNA (315bp) protein (105aa)
Two component heavy metal response transcriptional regulator, winged helix family n=2 Tax=Burkholderia multivorans RepID=A9AEB5_BURM1
cusR; transcriptional regulatory protein CusR
Heavy metal response regulator {ECO:0000313|EMBL:EJO56664.1}; TaxID=985078 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia
cn_combo_scaffold_5248_13
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9346..11250
DNA (1905bp) protein (635aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U8EHQ7_PSEAI
CopA family copper-resistance protein {ECO:0000313|EMBL:EJP76706.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotro
CopA family copper resistance protein
Displaying 13 items

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