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cn_combo_scaffold_8168

Alias: CNBR_UNK_553

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_8168_1
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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1..342
DNA (342bp) protein (114aa)
DNA polymerase beta domain protein region n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AZ67_AZOBR
Putative nucleotidyltransferase {ECO:0000313|EMBL:EXI71438.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. S
DNA polymerase beta domain protein region
cn_combo_scaffold_8168_2
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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332..709
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AZ66_AZOBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCD03225.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum b
cn_combo_scaffold_8168_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(985..1842)
DNA (858bp) protein (286aa)
Transcriptional regulator IclR n=2 Tax=Alicycliphilus denitrificans RepID=E8U014_ALIDB
IclR family transcriptional regulator
Transcriptional regulator IclR {ECO:0000313|EMBL:ADV01013.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphi
cn_combo_scaffold_8168_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1905..3080)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Advenella kashmirensis W13003 RepID=V8QXP0_9BURK
acyl-CoA dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
acyl-CoA dehydrogenase
cn_combo_scaffold_8168_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3181..3966)
DNA (786bp) protein (262aa)
short-chain dehydrogenase/reductase SDR; K07535 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Short-chain dehydrogenase/reductase SDR n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RY24_FERPA
short-chain dehydrogenase/reductase SDR
cn_combo_scaffold_8168_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3966..4760)
DNA (795bp) protein (265aa)
menB; naphthoate synthase (EC:4.1.3.36); K01661 naphthoate synthase [EC:4.1.3.36] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
menB; naphthoate synthase (EC:4.1.3.36)
Naphthoate synthase n=1 Tax=Rhodococcus sp. (strain RHA1) RepID=Q0RV58_RHOSR
cn_combo_scaffold_8168_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

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4889..6106
DNA (1218bp) protein (406aa)
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
Extracellular ligand-binding receptor id=3298093 bin=GWF2_Methylomirabilis_70_14 species=Deinococcus maricopensis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
livK; branched-chain amino acid ABC transporter substrate-binding protein
cn_combo_scaffold_8168_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6145..7020
DNA (876bp) protein (292aa)
ABC transporter permease; K01997 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
Branched-chain amino acid ABC transporter, membrane protein id=3298096 bin=GWF2_Methylomirabilis_70_14 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
branched-chain amino acid ABC transporter permease
cn_combo_scaffold_8168_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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7024..7620
DNA (597bp) protein (199aa)
Branched-chain amino acid ABC transporter, permease protein id=3298100 bin=GWF2_Methylomirabilis_70_14 species=Pseudomonas sp. genus=unknown taxon_order=unknown taxon_class=unknown phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid ABC transporter Tax=GWA2_Rokubacteria_70_23_curated
high-affinity branched-chain amino acid transport system permease protein LivH / high-affinity branched-chain amino acid transport ATP-binding protein LivG
Displaying 9 items

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