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cn_combo_scaffold_4033

Alias: CNBR_UNK_17

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_4033_1
Mus musculus, Mus, Rodentia, Mammalia, Chordata, Metazoa

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3..122
DNA (120bp) protein (40aa)
PREDICTED: hypothetical protein LOC100766337 n=1 Tax=Cricetulus griseus RepID=UPI00022F61D4
Krtap5-3, A030007E19Rik; keratin associated protein 5-3
Protein Gm4553; Uncharacterized protein; Flags: Fragment;; TaxID=10090 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus.;" source="Mus musculus (Mouse).;"
cn_combo_scaffold_4033_2

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153..431
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Gorilla gorilla gorilla RepID=G3RWT6_GORGO
Plasmid maintenance system killer protein {ECO:0000313|EMBL:CBI06332.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
higB; plasmid maintenance system killer protein
cn_combo_scaffold_4033_3
Burkholderia thailandensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(568..1674)
DNA (1107bp) protein (369aa)
PE-PGRS family protein n=3 Tax=Mycobacterium tuberculosis RepID=R4MW49_MYCTU
Putative transposase {ECO:0000313|EMBL:AGO89449.1}; TaxID=57975 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Bu
transposase, IS4
cn_combo_scaffold_4033_4
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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1782..2087
DNA (306bp) protein (102aa)
keratin-associated protein 5-2 n=1 Tax=Mus musculus RepID=UPI000241D714
vapL; plasmid maintenance system antidote protein
Plasmid maintenance system antidote protein {ECO:0000313|EMBL:BAN34138.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" sourc
cn_combo_scaffold_4033_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2888..4111)
DNA (1224bp) protein (408aa)
PE-PGRS family protein n=10 Tax=Mycobacterium tuberculosis RepID=R4M7F0_MYCTU
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
cn_combo_scaffold_4033_6
Nitrosomonas eutropha, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4160..4441
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Gorilla gorilla gorilla RepID=G3SK07_GORGO
plasmid maintenance system killer protein
Plasmid maintenance system killer {ECO:0000313|EMBL:ABI58456.1}; TaxID=335283 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitros
cn_combo_scaffold_4033_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4453..4773
DNA (321bp) protein (107aa)
keratin-associated protein 5-3 n=1 Tax=Mus musculus RepID=UPI0001B99E01
XRE family plasmid maintenance system antidote protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
XRE family plasmid maintenance system antidote protein
cn_combo_scaffold_4033_8
Legionella norrlandica, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5211..5444
DNA (234bp) protein (78aa)
PREDICTED: keratin-associated protein 5-4-like n=1 Tax=Equus caballus RepID=UPI0003ACD214
Transcriptional regulator {ECO:0000313|EMBL:KGP62325.1}; TaxID=1498499 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella norrlandi
transcriptional regulator
cn_combo_scaffold_4033_9
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5526..8237
DNA (2712bp) protein (904aa)
PE-PGRS family protein n=10 Tax=Mycobacterium tuberculosis RepID=R4M7F0_MYCTU
CRISPR-associated helicase Cas3 family protein {ECO:0000313|EMBL:EHY79335.1}; TaxID=32042 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" sour
CRISPR-associated helicase, Cas3 family
cn_combo_scaffold_4033_10
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8560..10137
DNA (1578bp) protein (526aa)
keratin-associated protein 5-3 n=1 Tax=Mus musculus RepID=UPI0001B99E01
CRISPR-associated Cse1 family protein {ECO:0000313|EMBL:EIK54348.1}; TaxID=477228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseu
CRISPR-associated Cse1 family protein
cn_combo_scaffold_4033_11
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10139..10711
DNA (573bp) protein (191aa)
keratin-associated protein 5-3 n=1 Tax=Mus musculus RepID=UPI0001B99E01
CRISPR-associated Cse2 family protein {ECO:0000313|EMBL:EIK54347.1}; TaxID=477228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseu
CRISPR-associated Cse2 family protein
cn_combo_scaffold_4033_12
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10732..11877
DNA (1146bp) protein (382aa)
keratin-associated protein 5-3 n=1 Tax=Mus musculus RepID=UPI0001B99E01
CRISPR-associated Cse4 family protein {ECO:0000313|EMBL:EIK54346.1}; TaxID=477228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseu
putative protein ygcJ
cn_combo_scaffold_4033_13
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11881..12549
DNA (669bp) protein (223aa)
keratin-associated protein 5-2 n=1 Tax=Mus musculus RepID=UPI000241D714
CRISPR-associated Cas5e family protein {ECO:0000313|EMBL:EIK54345.1}; TaxID=477228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI
cn_combo_scaffold_4033_14
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12524..13147
DNA (624bp) protein (208aa)
PREDICTED: keratin-associated protein 10-7-like n=1 Tax=Rattus norvegicus RepID=UPI00026879BD
CRISPR-associated protein Cse3 {ECO:0000313|EMBL:EWC39880.1}; TaxID=1218352 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
CRISPR-associated Cse3 family protein
cn_combo_scaffold_4033_15
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13144..14064
DNA (921bp) protein (307aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=32042 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadale
PE-PGRS family protein n=1 Tax=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) RepID=C1AHW5_MYCBT
CRISPR-associated Cas1 family protein
cn_combo_scaffold_4033_16
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14070..14369
DNA (300bp) protein (100aa)
UPI0003C8475D related cluster n=1 Tax=unknown RepID=UPI0003C8475D
Uncharacterized protein {ECO:0000313|EMBL:EIK54341.1}; TaxID=477228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutze
ssRNA endonuclease
cn_combo_scaffold_4033_17
Propionibacterium acidipropionici, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14286..16340)
DNA (2055bp) protein (685aa)
keratin-associated protein 5-3 n=1 Tax=Mus musculus RepID=UPI0001B99E01
Uncharacterized protein {ECO:0000313|EMBL:AFV90760.1}; TaxID=1171373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acidip
hypothetical protein
Displaying 17 items

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