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cn_combo_scaffold_4230

Alias: CNBR_UNK_19

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_4230_trna_1
unknown

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7..79
DNA (73bp)
transferRNA
cn_combo_scaffold_4230_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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445..1626
DNA (1182bp) protein (394aa)
keratin-associated protein 5-3 n=1 Tax=Mus musculus RepID=UPI0001B99E01
Uncharacterized protein {ECO:0000313|EMBL:EQL42351.1}; TaxID=1350465 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
Krtap5-3, A030007E19Rik; keratin associated protein 5-3
cn_combo_scaffold_4230_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1648..2100
DNA (453bp) protein (151aa)
keratin-associated protein 5-3 n=1 Tax=Mus musculus RepID=UPI0001B99E01
Krtap5-3, A030007E19Rik; keratin associated protein 5-3
Uncharacterized protein {ECO:0000313|EMBL:EQL42352.1}; TaxID=1350465 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
cn_combo_scaffold_4230_3
Acinetobacter sp. CIP 70.18, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2391..3410
DNA (1020bp) protein (340aa)
keratin-associated protein 5-2 n=1 Tax=Mus musculus RepID=UPI000241D714
Krtap5-2, 4833428E21Rik; keratin associated protein 5-2
Uncharacterized protein {ECO:0000313|EMBL:ENX56030.1}; TaxID=1217700 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp.
cn_combo_scaffold_4230_4

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3379..3714
DNA (336bp) protein (112aa)
keratin-associated protein 5-2 n=1 Tax=Mus musculus RepID=UPI000241D714
Uncharacterized protein {ECO:0000313|EMBL:KKN60817.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
nuclease
cn_combo_scaffold_4230_5

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comp(3655..4449)
DNA (795bp) protein (265aa)
keratin-associated protein 5-2 n=1 Tax=Mus musculus RepID=UPI000241D714
Uncharacterized protein {ECO:0000313|EMBL:EQD67072.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Krtap5-3, A030007E19Rik; keratin associated protein 5-3
cn_combo_scaffold_4230_6
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4456..7572)
DNA (3117bp) protein (1039aa)
PE-PGRS family protein n=1 Tax=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) RepID=C1AHW5_MYCBT
Restriction-modification system endonuclease {ECO:0000313|EMBL:KGM56452.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source
type I restriction-modification system endonuclease rbh
cn_combo_scaffold_4230_7
Nomascus leucogenys, Nomascus, Primates, Mammalia, Chordata, Metazoa

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comp(7569..7802)
DNA (234bp) protein (78aa)
keratin-associated protein 5-2 n=1 Tax=Mus musculus RepID=UPI000241D714
Krtap5-2, 4833428E21Rik; keratin associated protein 5-2
Uncharacterized protein; Flags: Fragment;; TaxID=61853 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus.;" source="Nomascus leucogenys (Northern white-cheeked gibbon) (Hylobates; leucogenys).;"
cn_combo_scaffold_4230_8
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7778..8281)
DNA (504bp) protein (168aa)
keratin-associated protein 5-3 n=1 Tax=Mus musculus RepID=UPI0001B99E01
phage P1-like protein
Phage P1-like protein {ECO:0000313|EMBL:BAP87347.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
cn_combo_scaffold_4230_9
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8278..8979)
DNA (702bp) protein (234aa)
keratin-associated protein 5-3 n=1 Tax=Mus musculus RepID=UPI0001B99E01
putative uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:BAP87341.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
cn_combo_scaffold_4230_10
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8976..10070)
DNA (1095bp) protein (365aa)
keratin-associated protein 5-3 n=1 Tax=Mus musculus RepID=UPI0001B99E01
Krtap5-3, A030007E19Rik; keratin associated protein 5-3
Uncharacterized protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
cn_combo_scaffold_4230_11
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10067..11395)
DNA (1329bp) protein (443aa)
restriction modification system, type I (EC:3.1.21.3); K01154 type I restriction enzyme, S subunit [EC:3.1.21.3] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
keratin-associated protein 5-3 n=1 Tax=Mus musculus RepID=UPI0001B99E01
type I restriction-modification system, specificity subunit S
cn_combo_scaffold_4230_12
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11385..12986)
DNA (1602bp) protein (534aa)
Cross-beta structure silk protein 1 n=1 Tax=Mallada signata RepID=C0LZW6_9NEOP
N-6 DNA methylase {ECO:0000313|EMBL:KGM55004.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis
DNA methyltransferase
cn_combo_scaffold_4230_13
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13016..13609)
DNA (594bp) protein (198aa)
keratin-associated protein 5-3 n=1 Tax=Mus musculus RepID=UPI0001B99E01
DNA invertase {ECO:0000313|EMBL:EQL42350.1}; TaxID=1350465 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFP
resolvase domain-containing protein
Displaying 14 items

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