ggKbase home page

BACIGN_2_7

Alias: SCN_BIgn_scaffold_7

Search features with annotation key words

Displaying items 1-30 of 168 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BACIGN_2_7_1
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(190..513)
DNA (324bp) protein (108aa)
hypothetical protein id=7718481 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
Uncharacterized protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
hypothetical protein
BACIGN_2_7_2
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

549..890
DNA (342bp) protein (114aa)
divalent ion tolerance protein; K03926 periplasmic divalent cation tolerance protein id=7718482 bin=BACIGN_2 species=Myxococcus sp. (contaminant ex DSM 436) genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP
Periplasmic divalent cation tolerance protein CutA {ECO:0000313|EMBL:KFE67097.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae;
divalent ion tolerance protein
divalent ion tolerance protein
BACIGN_2_7_3
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

903..1574
DNA (672bp) protein (224aa)
DNA repair protein RadC; K03630 DNA repair protein RadC id=7718483 bin=BACIGN_2 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
radC; DNA repair protein RadC; K03630 DNA repair protein RadC Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
DNA repair protein RadC
DNA repair protein RadC
BACIGN_2_7_4
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1600..2547
DNA (948bp) protein (316aa)
irk; Inward rectifier potassium channel Irk; K08715 inward rectifier potassium channel id=7718484 bin=BACIGN_2 species=Emticicia oligotrophica genus=Emticicia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Ion transport 2 domain protein
Ion transport 2 domain protein
Ion transport 2 domain protein {ECO:0000313|EMBL:AFK01897.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (stra
BACIGN_2_7_5
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2544..2885
DNA (342bp) protein (114aa)
id=7718485 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein Tax=GWA2_Bacteroidetes_40_15_curated
BACIGN_2_7_6
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2955..3848
DNA (894bp) protein (298aa)
chaperone DnaJ domain-containing protein; K05516 curved DNA-binding protein id=7718486 bin=BACIGN_2 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
molecular chaperone DnaJ
molecular chaperone DnaJ
Molecular chaperone DnaJ {ECO:0000313|EMBL:EJF09847.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
BACIGN_2_7_7
Brucella melitensis, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3882..4919
DNA (1038bp) protein (346aa)
ugpC; glycerol-3-phosphate transporter ATP-binding subunit; K05816 sn-glycerol 3-phosphate transport system ATP-binding protein [EC:3.6.3.20] id=7718487 bin=BACIGN_2 species=Ochrobactrum sp. CDB2 genus=Ochrobactrum taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP
sn-glycerol-3-phosphate import ATP-binding protein UgpC {ECO:0000255|HAMAP-Rule:MF_01727}; EC=3.6.3.20 {ECO:0000255|HAMAP-Rule:MF_01727};; TaxID=224914 species="Bacteria; Proteobacteria; Alphaproteoba
ugpC; glycerol-3-phosphate transporter ATP-binding subunit
ugpC; glycerol-3-phosphate transporter ATP-binding subunit
BACIGN_2_7_8
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(4914..5255)
DNA (342bp) protein (114aa)
hypothetical protein id=7718488 bin=BACIGN_2 species=Exiguobacterium antarcticum genus=Exiguobacterium taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein Tax=RBG_16_Chloroflexi_51_16_curated
hypothetical protein
hypothetical protein
BACIGN_2_7_9
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5287..6132)
DNA (846bp) protein (282aa)
3-hydroxyacyl-CoA dehydrogenase nad-binding protein (EC:1.1.1.157); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] id=7718489 bin=BACIGN_2 species=Marivirga tractuosa genus=Marivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
3-hydroxyacyl-CoA dehydrogenase nad-binding protein (EC:1.1.1.157)
3-hydroxyacyl-CoA dehydrogenase nad-binding protein (EC:1.1.1.157)
BACIGN_2_7_10
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

6247..7038
DNA (792bp) protein (264aa)
id=7718490 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7718490 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
BACIGN_2_7_11
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(6980..7771)
DNA (792bp) protein (264aa)
lgt; Phosphatidylglycerol:prolipoprotein diacylglycerol transferase id=7718491 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
prolipoprotein diacylglyceryl transferase Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
lgt; phosphatidylglycerol:prolipoprotein diacylglycerol transferase
lgt; phosphatidylglycerol:prolipoprotein diacylglycerol transferase
BACIGN_2_7_12
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(7901..10567)
DNA (2667bp) protein (889aa)
OmpA/MotB domain-containing protein id=7718492 bin=BACIGN_2 species=Pedobacter agri genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
OmpA/MotB domain-containing protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
OmpA/MotB domain-containing protein
OmpA/MotB domain-containing protein
BACIGN_2_7_13
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(10701..11549)
DNA (849bp) protein (283aa)
id=7718493 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
BACIGN_2_7_14
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

11597..13012
DNA (1416bp) protein (472aa)
rsmB; Ribosomal RNA small subunit methyltransferase B; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] id=7718494 bin=BACIGN_2 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
Ribosomal RNA small subunit methyltransferase B Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Ribosomal RNA small subunit methyltransferase B
Ribosomal RNA small subunit methyltransferase B
BACIGN_2_7_15
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

13054..13416
DNA (363bp) protein (121aa)
id=7718495 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7718495 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
BACIGN_2_7_16
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

comp(13529..14494)
DNA (966bp) protein (322aa)
id=7718496 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7718496 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
BACIGN_2_7_17
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

14817..15992
DNA (1176bp) protein (392aa)
hypothetical protein; K09769 hypothetical protein id=7718497 bin=BACIGN_2 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP
metallophosphoesterase Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
2',3'-cyclic-nucleotide 2'-phosphodiesterase
2',3'-cyclic-nucleotide 2'-phosphodiesterase
BACIGN_2_7_18
RBG_19FT_COMBO_Nitrospirae_55_12_curated, Nitrospirae, Bacteria

Not on your lists

16000..17478
DNA (1479bp) protein (493aa)
pyruvate kinase; K00873 pyruvate kinase [EC:2.7.1.40] id=7718498 bin=BACIGN_2 species=Desulfotomaculum reducens genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=BACIGN_2 organism_group=Unknown_CP
pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40] Tax=RBG_19FT_COMBO_Nitrospirae_55_12_curated
pyruvate kinase
pyruvate kinase
BACIGN_2_7_19
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(17482..20319)
DNA (2838bp) protein (946aa)
peptidase M16 domain-containing protein; K07263 zinc protease [EC:3.4.24.-] id=7718499 bin=BACIGN_2 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP
peptidase M16 domain-containing protein; K07263 zinc protease [EC:3.4.24.-] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
peptidase M16 domain-containing protein
peptidase M16 domain-containing protein
BACIGN_2_7_20
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

comp(20408..21532)
DNA (1125bp) protein (375aa)
Uncharacterized protein id=7718500 bin=BACIGN_2 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Uncharacterized protein id=7718500 bin=BACIGN_2 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
BACIGN_2_7_21
Rothia mucilaginosa, Rothia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21551..22324)
DNA (774bp) protein (258aa)
rRNA methylase; K00599 [EC:2.1.1.-] id=7718501 bin=BACIGN_2 species=Rothia mucilaginosa genus=Rothia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=BACIGN_2 organism_group=Unknown_CP
rRNA methylase
rRNA methylase
rRNA methylase {ECO:0000313|EMBL:BAI64904.1}; TaxID=680646 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Rothia.;" source="Rothia mucilaginosa (strain DY-18) (Stomatococcus mucilag
BACIGN_2_7_22
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

22387..23556
DNA (1170bp) protein (390aa)
Acyl-CoA dehydrogenase id=7718502 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
Acyl-CoA dehydrogenase Tax=GWB2_Ignavibacteria_35_6b_curated
acyl-CoA dehydrogenase
acyl-CoA dehydrogenase
BACIGN_2_7_23
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(23585..25252)
DNA (1668bp) protein (556aa)
hypothetical protein id=7718503 bin=BACIGN_2 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEP11237.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (stra
BACIGN_2_7_24
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(25249..25608)
DNA (360bp) protein (120aa)
TM2 domain-containing protein id=7718504 bin=BACIGN_2 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
TM2 domain-containing protein Tax=GWC2_Ignavibacteria_rel_36_12_curated
TM2 domain-containing protein
TM2 domain-containing protein
BACIGN_2_7_25
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

25740..25925
DNA (186bp) protein (62aa)
id=7718505 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7718505 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
BACIGN_2_7_26
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists


26052..26360
DNA (309bp) protein (103aa)
50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 id=7718506 bin=BACIGN_2 species=Pedobacter agri genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 Tax=GWF2_RIF_IGX_33_9_curated
50S ribosomal protein L21
50S ribosomal protein L21
BACIGN_2_7_27
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


26373..26633
DNA (261bp) protein (87aa)
rpl27; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 id=7718507 bin=BACIGN_2 species=Gloeocapsa sp. PCC 7428 genus=Gloeocapsa taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=BACIGN_2 organism_group=Unknown_CP
50S ribosomal protein L27
50S ribosomal protein L27
Tax=BJP_IG2069_Ignavibacteriae_38_11
BACIGN_2_7_28
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

26769..27752
DNA (984bp) protein (328aa)
malate dehydrogenase; K00024 malate dehydrogenase [EC:1.1.1.37] id=7718508 bin=BACIGN_2 species=Deinococcus peraridilitoris genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=BACIGN_2 organism_group=Unknown_CP
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476};; TaxID=937777 species="Bacteria; De
malate dehydrogenase
malate dehydrogenase
BACIGN_2_7_29
Providencia alcalifaciens, Providencia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27836..28498)
DNA (663bp) protein (221aa)
hypothetical protein id=7718509 bin=BACIGN_2 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=BACIGN_2 organism_group=Unknown_CP
Uncharacterized protein {ECO:0000313|EMBL:ETT06002.1}; TaxID=1256987 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Providencia.;" source="Providencia a
hypothetical protein
hypothetical protein
BACIGN_2_7_30
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

comp(28510..29445)
DNA (936bp) protein (312aa)
id=7718510 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7718510 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
Displaying items 1-30 of 168 in total

View Taxonomy