ggKbase home page

BACIGN_2_11

Alias: SCN_BIgn_scaffold_11

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BACIGN_2_11_1
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

2..2095
DNA (2094bp) protein (698aa)
hypothetical protein id=7718890 bin=BACIGN_2 species=Planctomyces brasiliensis genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY62314.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasi
BACIGN_2_11_2
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3029..3604
DNA (576bp) protein (192aa)
IS1 transposase id=7718891 bin=BACIGN_2 species=Emticicia oligotrophica genus=Emticicia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Insertion element protein
Insertion element protein
Insertion element protein {ECO:0000313|EMBL:AFK05702.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DS
BACIGN_2_11_3
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

comp(3597..4172)
DNA (576bp) protein (192aa)
id=7718892 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7718892 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
BACIGN_2_11_4
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5089..7173
DNA (2085bp) protein (695aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassifie
multi-sensor signal transduction histidine kinase id=7718893 bin=BACIGN_2 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
multi-sensor signal transduction histidine kinase
multi-sensor signal transduction histidine kinase
BACIGN_2_11_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7373..7750
DNA (378bp) protein (126aa)
hypothetical protein id=7718894 bin=BACIGN_2 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP40895.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
BACIGN_2_11_6
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7803..8408
DNA (606bp) protein (202aa)
hypothetical protein id=7718895 bin=BACIGN_2 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG59122.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC
BACIGN_2_11_7
Rubidibacter lacunae, Rubidibacter, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

8410..8772
DNA (363bp) protein (121aa)
cupin id=7718896 bin=BACIGN_2 species=unknown genus=unknown taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=BACIGN_2 organism_group=Unknown_CP
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:ERN42203.1}; TaxID=582515 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Rubidibacter.;" source="Rubidibacter lacunae KORDI 51-
cupin
cupin
BACIGN_2_11_8
Pseudohaliea rubra, Pseudohaliea, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8834..9193
DNA (360bp) protein (120aa)
Acyl-coenzyme A thioester hydrolase id=7718897 bin=BACIGN_2 species=Azotobacter vinelandii genus=Azotobacter taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP
4-hydroxybenzoyl-CoA thioesterase family active site protein {ECO:0000313|EMBL:KGE04851.1}; TaxID=1265313 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Pseudohaliea.;"
ybgC; acyl-coenzyme A thioester hydrolase
BACIGN_2_11_9
CG_Mariprof_01, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9190..9549
DNA (360bp) protein (120aa)
ferredoxin, 2Fe-2S id=7718898 bin=BACIGN_2 species=Parachlamydia acanthamoebae genus=Parachlamydia taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=BACIGN_2 organism_group=Unknown_CP
ferredoxin, 2Fe-2S Tax=CG_Mariprof_01
ferredoxin, 2Fe-2S
ferredoxin, 2Fe-2S
BACIGN_2_11_10
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9576..9953
DNA (378bp) protein (126aa)
hypothetical protein id=7718899 bin=BACIGN_2 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Uncharacterized protein {ECO:0000313|EMBL:CCH52118.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
hypothetical protein
BACIGN_2_11_11
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

comp(9869..10069)
DNA (201bp) protein (67aa)
id=7718900 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7718900 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
BACIGN_2_11_12
Chlorobaculum parvum, Chlorobaculum, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(10062..11411)
DNA (1350bp) protein (450aa)
chloride channel core protein; K03281 chloride channel protein, CIC family id=7718901 bin=BACIGN_2 species=Chlorobaculum parvum genus=Chlorobaculum taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP
chloride channel core protein
chloride channel core protein
Chloride channel core {ECO:0000313|EMBL:ACF11190.1}; TaxID=517417 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobaculum.;" source="Chlorobaculum parvum (strain NCIB 8327)
BACIGN_2_11_13
Flexibacter litoralis, Flexibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11408..11725)
DNA (318bp) protein (106aa)
hypothetical protein id=7718902 bin=BACIGN_2 species=Flexibacter litoralis genus=Flexibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM03544.1}; TaxID=880071 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Flexibacter.;" source="Flexibacter litoralis (strain ATCC
BACIGN_2_11_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11722..13056)
DNA (1335bp) protein (445aa)
Na+/H+ antiporter NhaA; K03313 Na+:H+ antiporter, NhaA family id=7718903 bin=BACIGN_2 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
Na(+)/H(+) antiporter nhaA; K03313 Na+:H+ antiporter, NhaA family Tax=GWA2_Rokubacteria_73_35_curated
Na+/H+ antiporter NhaA
Na+/H+ antiporter NhaA
BACIGN_2_11_15
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(13073..13942)
DNA (870bp) protein (290aa)
rfbA; dTDP-glucose pyrophosphorylase; K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] id=7718904 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
rfbA; dTDP-glucose pyrophosphorylase
rfbA; dTDP-glucose pyrophosphorylase
Tax=BJP_IG2069_Ignavibacteriae_38_11
BACIGN_2_11_16
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(13967..14686)
DNA (720bp) protein (240aa)
phoU; Phosphate transport system protein; K02039 phosphate transport system protein id=7718905 bin=BACIGN_2 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
phoU; Phosphate transport system protein; K02039 phosphate transport system protein Tax=GWA2_Ignavibacteria_54_16_curated
phoU; phosphate transport system protein
phoU; phosphate transport system protein
BACIGN_2_11_17
Leptospira sp. B5-022, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(14691..15458)
DNA (768bp) protein (256aa)
pstB; phosphate ABC transporter ATPase PstB (EC:3.6.3.27); K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] id=7718906 bin=BACIGN_2 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=BACIGN_2 organism_group=Unknown_CP
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-tran
pstB; phosphate ABC transporter ATPase PstB (EC:3.6.3.27)
pstB; phosphate ABC transporter ATPase PstB (EC:3.6.3.27)
BACIGN_2_11_18
Leptospira broomii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(15490..16398)
DNA (909bp) protein (303aa)
pstA; phosphate ABC transporter permease; K02038 phosphate transport system permease protein id=7718907 bin=BACIGN_2 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=BACIGN_2 organism_group=Unknown_CP
Phosphate ABC transporter, permease protein PstA {ECO:0000313|EMBL:EQA47005.1}; TaxID=1049789 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira broomii s
pstA; phosphate ABC transporter permease
pstA; phosphate ABC transporter permease
BACIGN_2_11_19
Leptospira sp. B5-022, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(16405..17676)
DNA (1272bp) protein (424aa)
pstC; phosphate ABC transporter permease; K02037 phosphate transport system permease protein id=7718908 bin=BACIGN_2 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=BACIGN_2 organism_group=Unknown_CP
Phosphate ABC transporter, permease protein PstC {ECO:0000313|EMBL:EMJ97849.1}; TaxID=1242992 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira sp. B5-02
pstC; phosphate ABC transporter permease
pstC; phosphate ABC transporter permease
BACIGN_2_11_20
Leptospira fainei, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(17676..18518)
DNA (843bp) protein (281aa)
phosphate binding protein; K02040 phosphate transport system substrate-binding protein id=7718909 bin=BACIGN_2 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=BACIGN_2 organism_group=Unknown_CP
Phosphate binding protein {ECO:0000313|EMBL:EPG73361.1}; TaxID=1193011 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira fainei serovar Hurstbridge str.
phosphate binding protein
phosphate binding protein
BACIGN_2_11_21
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(18710..19945)
DNA (1236bp) protein (412aa)
phosphate-selective porin O and P id=7718910 bin=BACIGN_2 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
phosphate-selective porin O and P
phosphate-selective porin O and P
Tax=BJP_IG2069_Ignavibacteriae_38_11
BACIGN_2_11_22
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

20030..20989
DNA (960bp) protein (320aa)
6-phosphofructokinase (EC:2.7.1.11); K00850 6-phosphofructokinase [EC:2.7.1.11] id=7718911 bin=BACIGN_2 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
6-phosphofructokinase (EC:2.7.1.11); K00850 6-phosphofructokinase [EC:2.7.1.11] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase (EC:2.7.1.11)
BACIGN_2_11_23
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

20999..21274
DNA (276bp) protein (92aa)
hypothetical protein id=7718912 bin=BACIGN_2 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein Tax=RBG_16_Zixibacteria_43_9_curated
hypothetical protein
hypothetical protein
BACIGN_2_11_24
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

21274..22140
DNA (867bp) protein (289aa)
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23); K00858 NAD+ kinase [EC:2.7.1.23] id=7718913 bin=BACIGN_2 species=unknown genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23)
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23)
Tax=BJP_IG2069_Ignavibacteriae_38_11
BACIGN_2_11_25
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22160..23503
DNA (1344bp) protein (448aa)
amino acid permease-associated protein id=7718914 bin=BACIGN_2 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Amino acid permease-associated region {ECO:0000313|EMBL:CCH56944.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.
amino acid permease-associated protein
amino acid permease-associated protein
BACIGN_2_11_26
Waddlia chondrophila, Waddlia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

23500..24387
DNA (888bp) protein (296aa)
LmbE family protein id=7718915 bin=BACIGN_2 species=Waddlia chondrophila genus=Waddlia taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=BACIGN_2 organism_group=Unknown_CP
LmbE family protein {ECO:0000313|EMBL:CCB92006.1}; TaxID=765953 species="Bacteria; Chlamydiae; Chlamydiales; Waddliaceae; Waddlia.;" source="Waddlia chondrophila 2032/99.;"
LmbE family protein
LmbE family protein
BACIGN_2_11_27
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24384..26018
DNA (1635bp) protein (545aa)
ade; adenine deaminase; K01486 adenine deaminase [EC:3.5.4.2] id=7718916 bin=BACIGN_2 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4
ade; adenine deaminase
ade; adenine deaminase
BACIGN_2_11_28
uncultured Bacteroidetes bacterium, Bacteroidetes, Bacteria

Not on your lists

26075..26944
DNA (870bp) protein (290aa)
nadC; nicotinate-nucleotide diphosphorylase; K00767 nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] id=7718917 bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Nicotinate-nucleotide diphosphorylase (Carboxylating) {ECO:0000313|EMBL:BAL55113.1}; TaxID=152509 species="Bacteria; Bacteroidetes; environmental samples.;" source="uncultured Bacteroidetes bacterium.
nadC; nicotinate-nucleotide diphosphorylase
nadC; nicotinate-nucleotide diphosphorylase
BACIGN_2_11_29
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

comp(26959..27564)
DNA (606bp) protein (202aa)
id=7718918 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7718918 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
BACIGN_2_11_30
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(27827..29446)
DNA (1620bp) protein (540aa)
RNA polymerase sigma 54 subunit RpoN; K03092 RNA polymerase sigma-54 factor id=7718919 bin=BACIGN_2 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
RNA polymerase sigma-54 subunit RpoN; K03092 RNA polymerase sigma-54 factor Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
RNA polymerase sigma 54 subunit RpoN
RNA polymerase sigma 54 subunit RpoN
Displaying items 1-30 of 63 in total

View Taxonomy