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cn_combo_scaffold_835

Alias: ERY14_4

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_835_1
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..924
DNA (924bp) protein (308aa)
Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase {ECO:0000313|EMBL:CCW16869.1}; EC=1.1.1.193 {ECO:0000313|EMBL:CCW16869.1};; EC=3.5.4.26 {ECO:0
riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26)
riboflavin biosynthesis protein RibD n=1 Tax=Sphingobium xenophagum RepID=UPI0002D8BB1C
cn_combo_scaffold_835_2
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1005..1619
DNA (615bp) protein (205aa)
Riboflavin synthase eubacterial/eukaryotic {ECO:0000313|EMBL:CCW16868.1}; EC=2.5.1.9 {ECO:0000313|EMBL:CCW16868.1};; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonada
ribE; riboflavin synthase alpha-chain (EC:2.5.1.9) rbh
riboflavin synthase subunit alpha n=1 Tax=Sphingobium xenophagum RepID=UPI0002EEC02D
cn_combo_scaffold_835_3
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1692..2972
DNA (1281bp) protein (427aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II {ECO:0000313|EMBL:CCW16867.1}; EC=3.5.4.25 {ECO:0000313|EMBL:CCW16867.1};; EC=4.1.99.12 {ECO:0000313|EMBL:CCW16867.1};; TaxID=1301
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Sphingobium xenophagum RepID=UPI00037ACA1D
3,4-dihydroxy-2-butanone 4-phosphate synthase
cn_combo_scaffold_835_4
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2983..3405
DNA (423bp) protein (141aa)
ribH; riboflavin synthase beta-chain (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Sphingobium xenophagum RepID=UPI000300A700
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
cn_combo_scaffold_835_5
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3516..4610)
DNA (1095bp) protein (365aa)
12-oxophytodienoate reductase (EC:1.3.1.42)
NADH:flavin oxidoreductase n=1 Tax=Sphingobium xenophagum RepID=UPI0002DD6877
N-ethylmaleimide reductase {ECO:0000313|EMBL:CCW16865.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium
cn_combo_scaffold_835_6
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4680..5246
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00031B1C00
Uncharacterized protein {ECO:0000313|EMBL:CCW16864.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium jap
hypothetical protein
cn_combo_scaffold_835_7
unknown

Not on your lists

5288..5956
DNA (669bp) protein (223aa)

This feature has no annotations

cn_combo_scaffold_835_8
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5910..8378)
DNA (2469bp) protein (823aa)
TonB-denpendent receptor n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00036681F1
TonB-dependent receptor {ECO:0000313|EMBL:KEO86522.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
TonB-dependent receptor
cn_combo_scaffold_835_9
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8551..9882
DNA (1332bp) protein (444aa)
Sugar transporter n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NBK0_ERYLH
sugar transporter rbh
Sugar transporter {ECO:0000313|EMBL:ABC62941.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litor
cn_combo_scaffold_835_10
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9891..10919
DNA (1029bp) protein (343aa)
LacI family transcriptional regulator n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0003192191
LacI family transcriptional regulator {ECO:0000313|EMBL:KEO86520.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source=
LacI family transcriptional regulator rbh
cn_combo_scaffold_835_11
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10916..11539)
DNA (624bp) protein (208aa)
6-phosphogluconolactonase (EC:3.1.1.31)
6-phosphogluconolactonase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HTJ6_9SPHN
6-phosphogluconolactonase {ECO:0000313|EMBL:EQB19701.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin
cn_combo_scaffold_835_12
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11545..12744)
DNA (1200bp) protein (400aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000300611D
sodium:proton exchanger
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_835_13
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12811..13434)
DNA (624bp) protein (208aa)
ketohydroxyglutarate aldolase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002FFC043
KDPG aldolase
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_835_14
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13439..15250)
DNA (1812bp) protein (604aa)
phosphogluconate dehydratase (EC:4.2.1.12)
phosphogluconate dehydratase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002F602CE
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_835_15
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15243..16697)
DNA (1455bp) protein (485aa)
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
glucose-6-phosphate 1-dehydrogenase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002E27D27
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_835_16
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16925..18214)
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00037561D7
glucose/galactose transporter
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_835_17
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18248..20659)
DNA (2412bp) protein (804aa)
beta-glucosidase (EC:3.2.1.21)
Glucan 1,4-beta-glucosidase n=2 Tax=Novosphingobium nitrogenifigens RepID=F1Z4S5_9SPHN
Glucan 1,4-beta-glucosidase {ECO:0000313|EMBL:EGD60387.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphi
cn_combo_scaffold_835_18
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20744..21922)
DNA (1179bp) protein (393aa)
Major facilitator superfamily MFS_1 n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PB18_9SPHN
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EDL48766.1}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="E
major facilitator superfamily transporter
cn_combo_scaffold_835_19
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21960..23018)
DNA (1059bp) protein (353aa)
LacI family transcriptional regulator n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B35304
LacI family transcriptional regulator Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
LacI family transcriptional regulator
cn_combo_scaffold_835_20
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23028..24029)
DNA (1002bp) protein (334aa)
Glucan endo-1,3-beta-D-glucosidase {ECO:0000313|EMBL:KGB51506.1}; EC=3.2.1.39 {ECO:0000313|EMBL:KGB51506.1};; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sp
Glucan endo-1,3-beta-D-glucosidase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GUN5_SPHAL
glucan endo-1,3-beta-D-glucosidase
cn_combo_scaffold_835_21
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24129..27431)
DNA (3303bp) protein (1101aa)
TonB-dependent receptor n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WHM3_9SPHN
TonB-dependent receptor Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
TonB-dependent receptor
cn_combo_scaffold_835_22
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27594..29102
DNA (1509bp) protein (503aa)
Tryptophan halogenase, putative n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WHM0_9SPHN
tryptophan halogenase
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_835_23
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29163..30185
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002D6415F
LacI family transcription regulator
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_835_24
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30235..33009)
DNA (2775bp) protein (925aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0003081A18
phosphoenolpyruvate carboxylase
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_835_25
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33006..33983)
DNA (978bp) protein (326aa)
glucokinase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000309B89C
glucokinase rbh
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_835_26
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34273..34896
DNA (624bp) protein (208aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|
GTP cyclohydrolase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0003014068
GTP cyclohydrolase I
cn_combo_scaffold_835_27
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34998..35492
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002EE0E47
Uncharacterized protein {ECO:0000313|EMBL:KEO87632.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
hypothetical protein
cn_combo_scaffold_835_28
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35502..36194
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002EF1798
Membrane protein {ECO:0000313|EMBL:KEO98774.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoral
cytochrome B561
cn_combo_scaffold_835_29
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36261..36740)
DNA (480bp) protein (160aa)
AhpC/TSA family protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WCY0_9SPHN
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:KEO98775.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrob
alkyl hydroperoxide reductase
cn_combo_scaffold_835_30
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36905..38335
DNA (1431bp) protein (477aa)
adenosylhomocysteinase (EC:3.3.1.1)
S-adenosyl-L-homocysteine hydrolase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000313A2A1
Tax=BJP_IG2102_Porphyrobacter_62_18
Displaying items 1-30 of 42 in total

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