ggKbase home page

cn_combo_scaffold_1211

Alias: ERY14_9

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1211_1
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..120
DNA (120bp) protein (40aa)
Shikimate dehydrogenase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WFY7_9SPHN
shikimate 5-dehydrogenase
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_1211_2
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128..793
DNA (666bp) protein (222aa)
Shikimate dehydrogenase {ECO:0000313|EMBL:AKH43329.1}; EC=1.1.1.25 {ECO:0000313|EMBL:AKH43329.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacter
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZU84_9SPHN
cn_combo_scaffold_1211_3
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

790..1383
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002FA39F2
coaE; dephospho-CoA kinase
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_1211_4
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1448..2143
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00031598E7
DNA polymerase III subunit epsilon
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_1211_5
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2207..2773
DNA (567bp) protein (189aa)
30S ribosomal protein S30 n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000366D28D
ribosome-associated protein Y
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_1211_6
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2941..3402
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002DFFCD4
nitrogen regulatory IIA
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_1211_7
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3420..3899
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WFY3_9SPHN
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_1211_8
Erythrobacter longus, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3899..4231
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WFY2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KEO89443.1}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter l
hypothetical protein
cn_combo_scaffold_1211_9
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4438..5094
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WFY1_9SPHN
Hydrolase {ECO:0000313|EMBL:KEO85811.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. JL475.;"
hypothetical protein
cn_combo_scaffold_1211_10
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5224..6018)
DNA (795bp) protein (265aa)
exodeoxyribonuclease III n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002EF9D90
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_1211_11
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6071..6400)
DNA (330bp) protein (110aa)
heme biosynthesis protein HemY n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002D3F533
Heme biosynthesis protein HemY {ECO:0000313|EMBL:KEO85809.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythr
HesB/YadR/YfhF
cn_combo_scaffold_1211_12
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6440..6871)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0003036E67
Histidine kinase {ECO:0000313|EMBL:KEO85808.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. JL
signal-transduction protein
cn_combo_scaffold_1211_13
Erythrobacter sp. NAP1, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7005..7316
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WFX8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EAQ28536.1}; TaxID=237727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
hypothetical protein
cn_combo_scaffold_1211_14
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7446..7886)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002DEED9C
ferredoxin
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_1211_15
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7883..10072)
DNA (2190bp) protein (730aa)
Prolyl oligopeptidase family protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WFX4_9SPHN
prolyl oligopeptidase
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_1211_16
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10138..10632)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002D9C4AC
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_1211_17
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10729..12204)
DNA (1476bp) protein (492aa)
Outer membrane protein TolC, putative n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WFX2_9SPHN
Membrane protein {ECO:0000313|EMBL:KEO85803.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. JL
outer membrane protein TolC
cn_combo_scaffold_1211_18
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12201..12821)
DNA (621bp) protein (207aa)
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WFX3_9SPHN
protein-L-isoaspartate O-methyltransferase
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_1211_19
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12996..14414
DNA (1419bp) protein (473aa)
Fumarate hydratase class II (EC:4.2.1.2)
fumarate hydratase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000374F3EA
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_1211_20
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14660..15922
DNA (1263bp) protein (421aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000316A7F6
sensor histidine kinase
cn_combo_scaffold_1211_21
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15912..16667
DNA (756bp) protein (252aa)
LytTR family transcriptional regulator n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002DECC65
two-component response regulator
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_1211_22
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16819..17142)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002D97046
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEO96564.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
cn_combo_scaffold_1211_23
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17264..17656
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N6M3_ERYLH
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_1211_24
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17660..18460
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WFW5_9SPHN
metallophosphoesterase
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_1211_25
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(18525..19040)
DNA (516bp) protein (172aa)
30S ribosomal protein S9 n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002ED62E2
rpsI; 30S ribosomal protein S9
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_1211_26
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(19040..19519)
DNA (480bp) protein (160aa)
50S ribosomal protein L13 n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00037FB97B
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; E
rplM; 50S ribosomal protein L13
cn_combo_scaffold_1211_27
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19690..20010)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002F354B6
Divalent cation transporter {ECO:0000313|EMBL:KEO96557.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobac
divalent cation tolerance protein
cn_combo_scaffold_1211_28
Erythrobacter sp. NAP1, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20007..21053)
DNA (1047bp) protein (349aa)
Heme A synthase {ECO:0000256|HAMAP-Rule:MF_01665}; Short=HAS {ECO:0000256|HAMAP-Rule:MF_01665};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_01665};; Cytochrome aa3-controlling protein {ECO:0000256|HAMAP-Ru
Heme A synthase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WFV9_9SPHN
cytochrome c oxidase assembly protein
cn_combo_scaffold_1211_29
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21236..21622
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WFV6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KEO96555.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
hypothetical protein
cn_combo_scaffold_1211_30
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21676..22659
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0003093A72
bifunctional sulfur carrier protein/thiazole synthase
Tax=BJP_IG2102_Porphyrobacter_62_18
Displaying items 1-30 of 49 in total

View Taxonomy