ggKbase home page

cn_combo_scaffold_1857

Alias: ERY14_21

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1857_1
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71..1513
DNA (1443bp) protein (481aa)
Ti-type conjugative transfer relaxase TraA n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QKE8_METTR
conjugal transfer relaxase TraA
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_1857_2
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1818..2477)
DNA (660bp) protein (220aa)
potassium transporter n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225EDF5
TrkA-N domain-containing protein
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
cn_combo_scaffold_1857_3
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2467..3795)
DNA (1329bp) protein (443aa)
Trk-type K+ transport systems, membrane components n=1 Tax=uncultured Sphingomonadales bacterium HF0500_24B12 RepID=E0XYI2_9SPHN
cation transporter
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
cn_combo_scaffold_1857_4
unknown

Not on your lists

3984..4073
DNA (90bp) protein (30aa)

This feature has no annotations

cn_combo_scaffold_1857_5
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4073..6082
DNA (2010bp) protein (670aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:M
UPI0003D5BCCD related cluster n=1 Tax=unknown RepID=UPI0003D5BCCD
hypothetical protein
cn_combo_scaffold_1857_6
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6098..6994
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI00037B4046
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
hypothetical protein
cn_combo_scaffold_1857_7
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7006..8664
DNA (1659bp) protein (553aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:M
UPI0003D5B0ED related cluster n=1 Tax=unknown RepID=UPI0003D5B0ED
osmosensitive K+ channel histidine kinase-like protein
cn_combo_scaffold_1857_8
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8700..9254
DNA (555bp) protein (185aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:M
UPI0003D03AFC related cluster n=1 Tax=unknown RepID=UPI0003D03AFC
ATPase
cn_combo_scaffold_1857_9
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9340..11916
DNA (2577bp) protein (859aa)
osmosensitive K+ channel signal transduction histidine kinase; K07646 two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
UPI0003D6754D related cluster n=1 Tax=unknown RepID=UPI0003D6754D
osmosensitive K+ channel signal transduction histidine kinase
cn_combo_scaffold_1857_10
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11909..12595
DNA (687bp) protein (229aa)
UPI0003D06931 related cluster n=1 Tax=unknown RepID=UPI0003D06931
two component transcriptional regulator; K07667 two-component system, OmpR family, KDP operon response regulator KdpE Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
transposase
cn_combo_scaffold_1857_11
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12976..14538
DNA (1563bp) protein (521aa)
hypothetical protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B5D539
penicillin-binding protein, beta-lactamase class C
Tax=BJP_IG2103_Clostridiales_50_15
cn_combo_scaffold_1857_12
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14780..16006)
DNA (1227bp) protein (409aa)
UPI0003CFF7AF related cluster n=1 Tax=unknown RepID=UPI0003CFF7AF
Integrase {ECO:0000313|EMBL:ESZ87088.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
symbiosis island integrase
cn_combo_scaffold_1857_trna_2
unknown

Not on your lists

comp(16171..16243)
DNA (73bp)
transferRNA
cn_combo_scaffold_1857_trna_1
unknown

Not on your lists

comp(16301..16371)
DNA (71bp)
transferRNA
cn_combo_scaffold_1857_13
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16533..17312
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00036C3DE7
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_1857_14
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17477..18295)
DNA (819bp) protein (273aa)
enoyl-CoA hydratase (EC:4.2.1.17)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002FE37CA
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_1857_15
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18386..18727)
DNA (342bp) protein (114aa)
Two-component response regulator n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WEA0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KEO92397.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
cn_combo_scaffold_1857_16
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18724..19191)
DNA (468bp) protein (156aa)
Putative DNA repair protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WE97_9SPHN
DNA repair protein RadC
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_1857_17
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19181..19690)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000303F57D
hypothetical protein
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_1857_18
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19703..20083)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WE95_9SPHN
hypothetical protein
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_1857_19
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20111..20716)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002FC9700
hypothetical protein
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_1857_20
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20820..22019)
DNA (1200bp) protein (400aa)
putative aminotransferase (EC:2.6.1.-)
aminotransferase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002EBE0A5
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_1857_21
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22194..24137
DNA (1944bp) protein (648aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002D7FCC5
poly-3-hydroxybutyrate synthase
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_1857_22
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24284..25093
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WE91_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KEO86370.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
hypothetical protein
cn_combo_scaffold_1857_23
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25264..25680
DNA (417bp) protein (139aa)
ATP-dependent Clp protease adaptor protein ClpS n=1 Tax=uncultured bacterium RepID=D6R6T8_9BACT
hypothetical protein
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_1857_24
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25699..26205
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WE89_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KEO92388.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
hypothetical protein
cn_combo_scaffold_1857_25
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26331..27596
DNA (1266bp) protein (422aa)
YjgP/YjgQ family permease n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00031DE935
Permease {ECO:0000313|EMBL:KEO92387.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis.;"
permease
cn_combo_scaffold_1857_26
Erythrobacter sp. NAP1, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27609..28718
DNA (1110bp) protein (370aa)
Predicted permease n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WE87_9SPHN
Predicted permease {ECO:0000313|EMBL:EAQ28059.1}; TaxID=237727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp.
permease
cn_combo_scaffold_1857_27
Erythrobacter sp. NAP1, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28729..29184
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00035FD2DF
Putative acetyltransferase {ECO:0000313|EMBL:EAQ28060.1}; TaxID=237727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobac
acetyltransferase
Displaying 29 items

View Taxonomy