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cn_combo_scaffold_2230

Alias: ERY14_29

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2230_1
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..335)
DNA (333bp) protein (111aa)
Hypothetical oxidoreductase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WCJ9_9SPHN
Oxidoreductase {ECO:0000313|EMBL:KEO98878.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis
NAD(P)H dehydrogenase (quinone)
cn_combo_scaffold_2230_2
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(467..1081)
DNA (615bp) protein (205aa)
30S ribosomal protein S4 n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002E606D9
rpsD; 30S ribosomal protein S4
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_2230_3
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1247..1993)
DNA (747bp) protein (249aa)
rRNA methyltransferase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00031BD918
rRNA methylase
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2230_4
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2003..2464)
DNA (462bp) protein (154aa)
NrdR family transcriptional regulator n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002E6D5CB
nrdR; transcriptional regulator NrdR
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2230_5
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2473..2682)
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002F7815A
hypothetical protein
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2230_6
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2695..4020)
DNA (1326bp) protein (442aa)
serine hydroxymethyltransferase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002F2F928
glyA; serine hydroxymethyltransferase
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2230_7
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4017..4496)
DNA (480bp) protein (160aa)
ribose 5-phosphate isomerase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002E53063
ribose 5-phosphate isomerase
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2230_8
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4616..6667)
DNA (2052bp) protein (684aa)
RNA polymerase sigma factor RpoD n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000306E85F
RNA polymerase sigma factor RpoD
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2230_9
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6738..8615)
DNA (1878bp) protein (626aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00031D34D6
DNA primase
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2230_10
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8694..9146)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0003050B6F
Aspartyl-tRNA amidotransferase {ECO:0000313|EMBL:KEO87106.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythr
hypothetical protein
cn_combo_scaffold_2230_11
Erythrobacter longus, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9291..10472
DNA (1182bp) protein (394aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
carbamoyl phosphate synthase small subunit (EC:6.3.5.5)
carbamoyl phosphate synthase small subunit n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0003733EE2
cn_combo_scaffold_2230_12
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10987..14313
DNA (3327bp) protein (1109aa)
carB; carbamoyl phosphate synthase large subunit (EC:6.3.5.5)
carbamoyl phosphate synthase large subunit n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002D8AF35
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2230_13
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14428..14904
DNA (477bp) protein (159aa)
transcription elongation factor GreA n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002E6F55E
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=39960 species="Bacteria;
greA; transcription elongation factor GreA
cn_combo_scaffold_2230_14
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14959..15189)
DNA (231bp) protein (77aa)
inositol monophosphatase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0003172968
hypothetical protein
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2230_15
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15267..15803)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002FD7631
Uncharacterized protein {ECO:0000313|EMBL:KEO87114.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
cn_combo_scaffold_2230_16
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15807..16157)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000300A85C
hypothetical protein
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2230_17
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16154..16573)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002E52D1A
hypothetical protein
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2230_18
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16609..17220)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WCH7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KEO87117.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
hypothetical protein
cn_combo_scaffold_2230_19
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17418..18695
DNA (1278bp) protein (426aa)
Enolase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WCG9_9SPHN
eno; phosphopyruvate hydratase
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2230_20
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18711..19064)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002DEBC5E
hypothetical protein
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_2230_21
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19867..20286)
DNA (420bp) protein (140aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WCH2_9SPHN
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
cn_combo_scaffold_2230_22
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20294..21541)
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002FDE5DB
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000313|EMBL:KEO98907.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;"
GTP cyclohydrolase II
cn_combo_scaffold_2230_trna_1
unknown

Not on your lists

comp(21650..21722)
DNA (73bp)
transferRNA
cn_combo_scaffold_2230_23
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21824..22828)
DNA (1005bp) protein (335aa)
Rod shape-determining protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WCG8_9SPHN
Rod shape-determining protein RodA {ECO:0000313|EMBL:KEO87124.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Er
rod shape-determining protein
cn_combo_scaffold_2230_24
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22951..24558)
DNA (1608bp) protein (536aa)
penicillin-binding protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00030AA969
cell division protein
Tax=BJP_IG2102_Porphyrobacter_62_18
Displaying 25 items

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