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cn_combo_scaffold_18

Alias: ACIDO32_1

Search features with annotation key words

Displaying items 1-30 of 292 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_18_1
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..440
DNA (438bp) protein (146aa)
hypothetical protein id=12553997 bin=CNBR_ACIDO species=Rhizobium gallicum genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI06587.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
cn_combo_scaffold_18_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

1147..1605
DNA (459bp) protein (153aa)
hypothetical protein id=12553998 bin=CNBR_ACIDO species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Radical SAM domain protein {ECO:0000313|EMBL:EEF61884.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="P
hypothetical protein
cn_combo_scaffold_18_3
CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, Acidobacteria, Bacteria

Not on your lists

1638..2273
DNA (636bp) protein (212aa)
id=12553999 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12553999 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cn_combo_scaffold_18_4
CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, Acidobacteria, Bacteria

Not on your lists

2472..2828
DNA (357bp) protein (119aa)
id=12554000 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12554000 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cn_combo_scaffold_18_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

2847..3278
DNA (432bp) protein (144aa)
hypothetical protein id=12554001 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
cn_combo_scaffold_18_6
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

3439..4536
DNA (1098bp) protein (366aa)
cytochrome c, class I id=12554002 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cytochrome c, class I Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
cytochrome c, class I
cn_combo_scaffold_18_7
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4536..5234
DNA (699bp) protein (233aa)
hypothetical protein id=12554003 bin=CNBR_ACIDO species=Hyphomicrobium zavarzinii genus=Hyphomicrobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Similar to nodulin 21 {ECO:0000313|EMBL:CCW16768.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japon
membrane protein
cn_combo_scaffold_18_8
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

5407..5940
DNA (534bp) protein (178aa)
hypothetical protein id=12554004 bin=CNBR_ACIDO species=Burkholderia thailandensis genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein
cn_combo_scaffold_18_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

5950..6288
DNA (339bp) protein (113aa)
hypothetical protein id=12554005 bin=CNBR_ACIDO species=Burkholderia thailandensis genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
cn_combo_scaffold_18_10
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

6328..8490
DNA (2163bp) protein (721aa)
putative acetyl-coenzyme A synthetase; K09181 hypothetical protein id=12554006 bin=CNBR_ACIDO species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative acetyl-coenzyme A synthetase
Putative acetyl-coenzyme A synthetase {ECO:0000313|EMBL:BAL98965.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila
cn_combo_scaffold_18_11
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(8480..9361)
DNA (882bp) protein (294aa)
hypothetical protein id=12554007 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
usp; universal stress protein Usp Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein
cn_combo_scaffold_18_12
Thermosynechococcus elongatus, Thermosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

9632..12079
DNA (2448bp) protein (816aa)
phosphoenolpyruvate synthase (EC:2.7.9.2); K01007 pyruvate, water dikinase [EC:2.7.9.2] id=12554008 bin=CNBR_ACIDO species=Verrucomicrobium sp. 3C genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PI
cn_combo_scaffold_18_13
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12042..12425)
DNA (384bp) protein (128aa)
peptidoglycan-binding LysM id=12554009 bin=CNBR_ACIDO species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
peptidoglycan-binding LysM Tax=RBG_16_Gammaproteobacteria_57_12_curated
peptidoglycan-binding LysM
cn_combo_scaffold_18_14
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12440..13762)
DNA (1323bp) protein (441aa)
oxidoreductase FAD/NAD(P)-binding domain-containing protein id=12554010 bin=CNBR_ACIDO species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:AJF05555.1}; TaxID=483547 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter subter
cn_combo_scaffold_18_15

Not on your lists

comp(13831..14433)
DNA (603bp) protein (201aa)
id=12554011 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Marine sediment metagenome DNA, contig: S01H1_L00526 {ECO:0000313|EMBL:GAF84439.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
cn_combo_scaffold_18_16
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(14430..15467)
DNA (1038bp) protein (346aa)
bile acid:sodium symporter; K03453 bile acid:Na+ symporter, BASS family id=12554012 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative transporter; K03453 bile acid:Na+ symporter, BASS family Tax=RBG_16_Acidobacteria_70_10_curated
bile acid:sodium symporter
cn_combo_scaffold_18_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(15464..17575)
DNA (2112bp) protein (704aa)
quinoprotein glucose dehydrogenase (EC:1.1.5.2); K00117 quinoprotein glucose dehydrogenase [EC:1.1.5.2] id=12554013 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
quinoprotein glucose dehydrogenase (EC:1.1.5.2)
Quinoprotein glucose dehydrogenase {ECO:0000313|EMBL:ABJ82042.1}; EC=1.1.5.2 {ECO:0000313|EMBL:ABJ82042.1};; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibactera
cn_combo_scaffold_18_18
Sphingomonas sp. BHC-A, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17762..18706
DNA (945bp) protein (315aa)
hypothetical protein id=12554014 bin=CNBR_ACIDO species=Sphingobium indicum genus=Sphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:KEY97301.1}; TaxID=322611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomo
hypothetical protein
cn_combo_scaffold_18_19
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

18744..19154
DNA (411bp) protein (137aa)
hypothetical protein id=12554015 bin=CNBR_ACIDO species=Terriglobus roseus genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL88063.1}; Flags: Precursor;; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus
cn_combo_scaffold_18_20
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

19169..20194
DNA (1026bp) protein (342aa)
gluconolactonase id=12554016 bin=CNBR_ACIDO species=Terriglobus roseus genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
gluconolactonase
Gluconolactonase {ECO:0000313|EMBL:AFL88064.1}; Flags: Precursor;; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain
cn_combo_scaffold_18_21
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(20204..21388)
DNA (1185bp) protein (395aa)
esterase id=12554017 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
esterase
Putative esterase {ECO:0000313|EMBL:ABJ83063.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solib
cn_combo_scaffold_18_22
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(21432..23891)
DNA (2460bp) protein (820aa)
alpha/beta hydrolase domain-containing protein; K15923 alpha-L-fucosidase 2 [EC:3.2.1.51] id=12554018 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Glycerol-3-phosphate dehydrogenase {ECO:0000313|EMBL:CDM64194.1}; EC=3.2.1.51 {ECO:0000313|EMBL:CDM64194.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;"
alpha/beta hydrolase domain-containing protein
cn_combo_scaffold_18_23
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(23916..24668)
DNA (753bp) protein (251aa)
Acetyl xylan esterase id=12554019 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Acetyl xylan esterase
Acetyl xylan esterase {ECO:0000313|EMBL:ABJ83974.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="S
cn_combo_scaffold_18_24
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(24697..26286)
DNA (1590bp) protein (530aa)
glycoside hydrolase family protein id=12554020 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glycoside hydrolase family protein
Glycoside hydrolase, family 43 {ECO:0000313|EMBL:ABJ83973.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;"
cn_combo_scaffold_18_25
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

26384..27802
DNA (1419bp) protein (473aa)
mandelate racemase/muconate lactonizing protein id=12554021 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
mandelate racemase/muconate lactonizing protein
Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein {ECO:0000313|EMBL:ABJ86007.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales;
cn_combo_scaffold_18_26
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

27817..28899
DNA (1083bp) protein (361aa)
esterase id=12554022 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
esterase
Putative esterase {ECO:0000313|EMBL:ABJ83978.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solib
cn_combo_scaffold_18_27

Not on your lists

comp(28859..29392)
DNA (534bp) protein (178aa)
putative GCN5-related N-acetyltransferase id=12554023 bin=CNBR_ACIDO species=Zavarzinella formosa genus=Zavarzinella taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Marine sediment metagenome DNA, contig: S06H3_S02778 {ECO:0000313|EMBL:GAI21775.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
putative GCN5-related N-acetyltransferase
cn_combo_scaffold_18_28
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(29430..29810)
DNA (381bp) protein (127aa)
hypothetical protein id=12554024 bin=CNBR_ACIDO species=Hymenobacter norwichensis genus=Hymenobacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Putative membrane protein {ECO:0000313|EMBL:EMI22497.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula
hypothetical protein
cn_combo_scaffold_18_29
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29858..30259)
DNA (402bp) protein (134aa)
hypothetical protein id=12554025 bin=CNBR_ACIDO species=Pseudomonas fluorescens genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein {ECO:0000313|EMBL:KFG66505.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.
hypothetical protein
cn_combo_scaffold_18_30
CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, Acidobacteria, Bacteria

Not on your lists

30413..30574
DNA (162bp) protein (54aa)
id=12554026 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12554026 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Displaying items 1-30 of 292 in total

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