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cn_combo_scaffold_65

Alias: ACIDO32_3

Search features with annotation key words

Displaying items 1-30 of 158 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_65_1
CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, Acidobacteria, Bacteria

Not on your lists

comp(1..111)
DNA (111bp) protein (37aa)
id=12557206 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12557206 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cn_combo_scaffold_65_2
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(415..1494)
DNA (1080bp) protein (360aa)
two component sigma-54 specific Fis family transcriptional regulator id=12557207 bin=CNBR_ACIDO species=unknown genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein {ECO:0000313|EMBL:KDA53549.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
two component sigma-54 specific Fis family transcriptional regulator
cn_combo_scaffold_65_3
CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, Acidobacteria, Bacteria

Not on your lists

comp(1603..2100)
DNA (498bp) protein (166aa)
id=12557208 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12557208 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cn_combo_scaffold_65_4
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

2247..4157
DNA (1911bp) protein (637aa)
outer membrane efflux protein id=12557209 bin=CNBR_ACIDO species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein {ECO:0000313|EMBL:KDA53544.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
outer membrane efflux protein
cn_combo_scaffold_65_5
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

4157..6376
DNA (2220bp) protein (740aa)
outer membrane efflux protein id=12557210 bin=CNBR_ACIDO species=Rudaea cellulosilytica genus=Rudaea taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein {ECO:0000313|EMBL:KDA53543.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
outer membrane efflux protein
cn_combo_scaffold_65_6
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6524..7702
DNA (1179bp) protein (393aa)
membrane-fusion protein id=12557211 bin=CNBR_ACIDO species=Novispirillum itersonii genus=Novispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
membrane-fusion protein
Membrane-fusion protein {ECO:0000313|EMBL:AFK53352.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis
cn_combo_scaffold_65_7
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

7712..9922
DNA (2211bp) protein (737aa)
SunT; bacteriocin/lantibiotic ABC transporter id=12557212 bin=CNBR_ACIDO species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ABC transporter {ECO:0000313|EMBL:KDA53541.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
SunT; bacteriocin/lantibiotic ABC transporter
cn_combo_scaffold_65_8
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

9924..13934
DNA (4011bp) protein (1337aa)
NHLM bacteriocin system ABC transporter, ATP-binding protein id=12557213 bin=CNBR_ACIDO species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein {ECO:0000313|EMBL:KDA53540.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
NHLM bacteriocin system ABC transporter, ATP-binding protein
cn_combo_scaffold_65_9
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

13981..15123
DNA (1143bp) protein (381aa)
hypothetical protein id=12557214 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein {ECO:0000313|EMBL:KIJ74971.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
hypothetical protein
cn_combo_scaffold_65_10
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15120..15593
DNA (474bp) protein (158aa)
putative anti-sigma regulatory factor id=12557215 bin=CNBR_ACIDO species=Methyloferula stellata genus=Methyloferula taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative anti-sigma regulatory factor Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
putative anti-sigma regulatory factor
cn_combo_scaffold_65_11
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(15631..17262)
DNA (1632bp) protein (544aa)
protein serine/threonine phosphatase with GAF(s) sensor(s) id=12557216 bin=CNBR_ACIDO species=Planctomyces brasiliensis genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
protein serine phosphatase Tax=RBG_16_Planctomycetes_64_10_curated
protein serine/threonine phosphatase with GAF(s) sensor(s)
cn_combo_scaffold_65_12
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(17300..17839)
DNA (540bp) protein (180aa)
anti-sigma factor antagonist id=12557217 bin=CNBR_ACIDO species=unknown genus=Pusillimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Putative anti-sigma factor antagonist Tax=RBG_16_Acidobacteria_70_10_curated
anti-sigma factor antagonist
cn_combo_scaffold_65_13
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(17843..19000)
DNA (1158bp) protein (386aa)
ABC transporter ATP-binding protein id=12557218 bin=CNBR_ACIDO species=Nocardia sp. BMG111209 genus=Nocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
FHA domain containing protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
FHA domain-containing protein
cn_combo_scaffold_65_14
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19060..21153)
DNA (2094bp) protein (698aa)
serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] id=12557219 bin=CNBR_ACIDO species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Serine/threonine protein kinase PrkC, regulator of stationary phase {ECO:0000313|EMBL:EPX62165.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae;
serine/threonine protein kinase
cn_combo_scaffold_65_15
Burkholderia thailandensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21224..22423)
DNA (1200bp) protein (400aa)
hypothetical protein id=12557220 bin=CNBR_ACIDO species=Burkholderia thailandensis genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIP65641.1}; TaxID=57975 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source=
cn_combo_scaffold_65_16
RBG_13_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(22475..23482)
DNA (1008bp) protein (336aa)
FemAB family protein id=12557221 bin=CNBR_ACIDO species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
FemAB family protein Tax=RBG_13_Chloroflexi_56_8_curated
FemAB family protein
cn_combo_scaffold_65_17
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(23479..24384)
DNA (906bp) protein (302aa)
GCN5-related N-acetyltransferase id=12557222 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
GCN5-related N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACC84960.1}; TaxID=63737 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc punctiforme (strain ATCC 29133 / PCC 731
cn_combo_scaffold_65_18
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24520..25836
DNA (1317bp) protein (439aa)
hypothetical protein id=12557223 bin=CNBR_ACIDO species=Brevundimonas sp. BAL3 genus=Brevundimonas taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Putative uncharacterized protein {ECO:0000313|EMBL:EDX80634.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevund
hypothetical protein
cn_combo_scaffold_65_19
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25872..26627)
DNA (756bp) protein (252aa)
methyltransferase id=12557224 bin=CNBR_ACIDO species=Azorhizobium caulinodans genus=Azorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:BAF89025.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caul
cn_combo_scaffold_65_20
Streptomyces sp. SPB78, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26695..27888
DNA (1194bp) protein (398aa)
eryF; cytochrome P450 107B1 id=12557225 bin=CNBR_ACIDO species=Streptomyces sp. SPB78 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Cytochrome P-450 hydroxylase {ECO:0000313|EMBL:EFL03626.1}; TaxID=591157 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. (strain SPB78)
eryF; cytochrome P450 107B1
cn_combo_scaffold_65_21
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27907..28989
DNA (1083bp) protein (361aa)
hypothetical protein id=12557226 bin=CNBR_ACIDO species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Conserved uncharacterized protein {ECO:0000313|EMBL:ADO72099.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" s
cn_combo_scaffold_65_22
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29055..29876)
DNA (822bp) protein (274aa)
hypothetical protein id=12557227 bin=CNBR_ACIDO species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN91553.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
cn_combo_scaffold_65_23
CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, Acidobacteria, Bacteria

Not on your lists

comp(29967..30803)
DNA (837bp) protein (279aa)
id=12557228 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12557228 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cn_combo_scaffold_65_24
CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, Acidobacteria, Bacteria

Not on your lists

31069..31413
DNA (345bp) protein (115aa)
id=12557229 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12557229 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cn_combo_scaffold_65_25
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(31432..32052)
DNA (621bp) protein (207aa)
lipoate-protein ligase B; K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181] id=12557230 bin=CNBR_ACIDO species=Myxococcus fulvus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
lipoate-protein ligase B (EC:2.3.1.181); K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
lipoate-protein ligase B
cn_combo_scaffold_65_26
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(32094..33329)
DNA (1236bp) protein (412aa)
dihydrolipoyllysine-residue succinyltransferase (EC:2.3.1.61); K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] id=12557231 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
dihydrolipoyllysine-residue succinyltransferase (EC:2.3.1.61); K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] Tax=RIFCSPLOWO2_12_FULL_Acidobacter
dihydrolipoyllysine-residue succinyltransferase (EC:2.3.1.61)
cn_combo_scaffold_65_27
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(33466..34881)
DNA (1416bp) protein (472aa)
alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] id=12557232 bin=CNBR_ACIDO species=Myxococcus sp. (contaminant ex DSM 436) genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
dihydrolipoamide dehydrogenase (EC:1.8.1.4); K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase
cn_combo_scaffold_65_28
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(34996..35295)
DNA (300bp) protein (100aa)
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta id=12557233 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
histone family protein DNA-binding protein
cn_combo_scaffold_65_29
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

35475..35819
DNA (345bp) protein (115aa)
7-cyano-7-deazaguanine reductase (EC:1.7.1.13) id=12557234 bin=CNBR_ACIDO species=Schlesneria paludicola genus=Schlesneria taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
7-cyano-7-deazaguanine reductase (EC:1.7.1.13)
7-cyano-7-deazaguanine reductase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
cn_combo_scaffold_65_30
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

36180..38576
DNA (2397bp) protein (799aa)
helicase/SNF2 family domain protein id=12557235 bin=CNBR_ACIDO species=Salinispora pacifica genus=Salinispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ERCC4-like helicases Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
helicase/SNF2 family domain protein
Displaying items 1-30 of 158 in total

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