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cn_combo_scaffold_90

Alias: ACIDO32_5

Search features with annotation key words

Displaying items 1-30 of 162 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_90_1
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(271..2259)
DNA (1989bp) protein (663aa)
Heavy metal translocating P-type ATPase id=12554286 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Heavy metal translocating P-type ATPase
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ADZ72434.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793
cn_combo_scaffold_90_2
unknown

Not on your lists

comp(2437..2649)
DNA (213bp) protein (71aa)

This feature has no annotations

cn_combo_scaffold_90_3
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2783..3232
DNA (450bp) protein (150aa)
DNA-binding stress protein; K04047 starvation-inducible DNA-binding protein id=12554288 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA-binding stress protein
DNA-binding stress protein {ECO:0000313|EMBL:BAH40559.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain
cn_combo_scaffold_90_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(3339..4001)
DNA (663bp) protein (221aa)
FHA domain-containing protein id=12554289 bin=CNBR_ACIDO species=Dyella japonica genus=Dyella taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
transcriptional regulator domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
cn_combo_scaffold_90_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

4091..4975
DNA (885bp) protein (295aa)
forkhead-associated protein id=12554290 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
forkhead-associated protein
Forkhead-associated protein {ECO:0000313|EMBL:ABJ88426.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usi
cn_combo_scaffold_90_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

5074..6723
DNA (1650bp) protein (550aa)
Ser/Thr phosphatase id=12554291 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Ser/Thr phosphatase
Protein serine/threonine phosphatase {ECO:0000313|EMBL:ABJ88427.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solib
cn_combo_scaffold_90_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

6726..8708
DNA (1983bp) protein (661aa)
serine/threonine protein kinase id=12554292 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ABJ88428.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter
cn_combo_scaffold_90_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

8708..12010
DNA (3303bp) protein (1101aa)
penicillin-binding protein, transpeptidase id=12554293 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
penicillin-binding protein, transpeptidase
Penicillin-binding protein, transpeptidase {ECO:0000313|EMBL:ABJ88429.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
cn_combo_scaffold_90_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

12016..12837
DNA (822bp) protein (274aa)
FHA domain-containing protein id=12554294 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
FHA domain-containing protein
FHA domain containing protein {ECO:0000313|EMBL:ABJ88430.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter u
cn_combo_scaffold_90_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(12857..13288)
DNA (432bp) protein (144aa)
hypothetical protein
Uncharacterized protein id=12554295 bin=CNBR_ACIDO species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
cn_combo_scaffold_90_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

13375..14964
DNA (1590bp) protein (530aa)
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein id=12554296 bin=CNBR_ACIDO species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Oxidoreductase {ECO:0000313|EMBL:EEF61853.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera p
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
cn_combo_scaffold_90_12
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

15035..15496
DNA (462bp) protein (154aa)
transcriptional regulator, effector-binding domain/component id=12554297 bin=CNBR_ACIDO species=Arenimonas oryziterrae genus=Arenimonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
transcriptional regulator, effector-binding domain/component
Transcriptional regulator, effector-binding domain/component {ECO:0000313|EMBL:AGA26235.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singuli
cn_combo_scaffold_90_13
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

15530..16489
DNA (960bp) protein (320aa)
lipase/esterase id=12554298 bin=CNBR_ACIDO species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Probable lipase/esterase {ECO:0000313|EMBL:EDL56428.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;
lipase/esterase
cn_combo_scaffold_90_14
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

16493..16750
DNA (258bp) protein (86aa)
hypothetical protein id=12554299 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein {ECO:0000313|EMBL:ABJ83302.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
cn_combo_scaffold_90_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

16762..18018
DNA (1257bp) protein (419aa)
putative acetyl xylan esterase id=12554300 bin=CNBR_ACIDO species=Alistipes sp. JC136 genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Putative acetyl xylan esterase {ECO:0000313|EMBL:EDY20449.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin4
putative acetyl xylan esterase
cn_combo_scaffold_90_16
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(18170..19867)
DNA (1698bp) protein (566aa)
deaD; RNA helicase dead; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13] id=12554301 bin=CNBR_ACIDO species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
deaD; RNA helicase dead; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
deaD; RNA helicase dead
cn_combo_scaffold_90_17
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20035..20787
DNA (753bp) protein (251aa)
short-chain dehydrogenase/reductase SDR id=12554302 bin=CNBR_ACIDO species=Chelatococcus sp. GW1 genus=Chelatococcus taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KGM34460.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limos
short-chain dehydrogenase/reductase SDR
cn_combo_scaffold_90_18
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20833..21234
DNA (402bp) protein (134aa)
DoxX family protein id=12554303 bin=CNBR_ACIDO species=Janthinobacterium lividum genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DoxX {ECO:0000313|EMBL:EZP39126.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
DoxX family protein
cn_combo_scaffold_90_19
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

21308..22027
DNA (720bp) protein (240aa)
G-D-S-L family lipolytic protein id=12554304 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
G-D-S-L family lipolytic protein Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
hypothetical protein
cn_combo_scaffold_90_20
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

22103..23575
DNA (1473bp) protein (491aa)
major facilitator transporter id=12554305 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
major facilitator transporter Tax=GWC2_Ignavibacteria_rel_36_12_curated
major facilitator superfamily transporter
cn_combo_scaffold_90_21
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(23663..26524)
DNA (2862bp) protein (954aa)
putative metallopeptidase; K07263 zinc protease [EC:3.4.24.-] id=12554306 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative metallopeptidase; K07263 zinc protease [EC:3.4.24.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
peptidase M16 domain protein
cn_combo_scaffold_90_22
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26623..27441)
DNA (819bp) protein (273aa)
glutamate racemase (EC:5.1.1.3); K01776 glutamate racemase [EC:5.1.1.3] id=12554307 bin=CNBR_ACIDO species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1385368 species="Bacteria; Prot
glutamate racemase (EC:5.1.1.3)
cn_combo_scaffold_90_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(27532..28953)
DNA (1422bp) protein (474aa)
glycoside hydrolase family protein id=12554308 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glycoside hydrolase family 28
Glycoside hydrolase family 28 {ECO:0000313|EMBL:AHG87910.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_90_24
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(28977..29384)
DNA (408bp) protein (136aa)
id=12554309 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12554309 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
cn_combo_scaffold_90_25
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(29377..29718)
DNA (342bp) protein (114aa)
id=12554310 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12554310 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
cn_combo_scaffold_90_26
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(29766..32432)
DNA (2667bp) protein (889aa)
hypothetical protein id=12554311 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
cn_combo_scaffold_90_27
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32505..33614)
DNA (1110bp) protein (370aa)
add; adenosine deaminase (EC:3.5.4.4); K01488 adenosine deaminase [EC:3.5.4.4] id=12554312 bin=CNBR_ACIDO species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
add; adenosine deaminase (EC:3.5.4.4)
Putative Adenosine deaminase {ECO:0000313|EMBL:CAN99178.1}; EC=3.5.4.4 {ECO:0000313|EMBL:CAN99178.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae;
cn_combo_scaffold_90_28
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(33672..34001)
DNA (330bp) protein (110aa)
transcriptional regulator, PadR-family id=12554313 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
transcriptional regulator, PadR-family Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
transcriptional regulator, PadR-family
cn_combo_scaffold_90_29
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(34106..34537)
DNA (432bp) protein (144aa)
id=12554314 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12554314 Tax=RBG_16_Gemmatimonadetes_66_8_curated
cn_combo_scaffold_90_30
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

34758..35858
DNA (1101bp) protein (367aa)
hypothetical protein id=12554315 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL88539.1}; Flags: Precursor;; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus
Displaying items 1-30 of 162 in total

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