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cn_combo_scaffold_166

Alias: ACIDO32_8

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Displaying items 1-30 of 211 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_166_1
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66..329
DNA (264bp) protein (88aa)
tnpA; IS3/IS407-type transposase; K07497 putative transposase id=12556823 bin=CNBR_ACIDO species=Perlucidibaca piscinae genus=Perlucidibaca taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
transposase
Transposase {ECO:0000313|EMBL:AIU26153.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
cn_combo_scaffold_166_2
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(964..1989)
DNA (1026bp) protein (342aa)
transposase id=12556824 bin=CNBR_ACIDO species=Azospirillum sp. genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
integrase
Integrase {ECO:0000313|EMBL:AIB16653.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
cn_combo_scaffold_166_3
Streptomyces glaucescens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2219..3637)
DNA (1419bp) protein (473aa)
hypothetical protein id=12556825 bin=CNBR_ACIDO species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative secreted protein
Putative secreted protein {ECO:0000313|EMBL:AIS02458.1}; TaxID=1907 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces glaucescens.;"
cn_combo_scaffold_166_4
Bifidobacterium minimum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3908..4639
DNA (732bp) protein (244aa)
hypothetical protein id=12556826 bin=CNBR_ACIDO species=Actinomyces odontolyticus genus=Actinomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein {ECO:0000313|EMBL:KFI72989.1}; TaxID=1693 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium minimum.;"
hypothetical protein
cn_combo_scaffold_166_5
Bifidobacterium boum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5015..5815
DNA (801bp) protein (267aa)
hypothetical protein id=12556827 bin=CNBR_ACIDO species=Streptomyces sp. HK1 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein {ECO:0000313|EMBL:KFI48492.1}; TaxID=78343 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium boum.;"
hypothetical protein
cn_combo_scaffold_166_6
Streptomyces sp. Tu6071, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6772..7419)
DNA (648bp) protein (216aa)
hypothetical protein id=12556829 bin=CNBR_ACIDO species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGJ72704.1}; TaxID=355249 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Tu6071.;"
cn_combo_scaffold_166_7
Bifidobacterium boum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9000..9962
DNA (963bp) protein (321aa)
hypothetical protein id=12556830 bin=CNBR_ACIDO species=Actinomyces odontolyticus genus=Actinomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein {ECO:0000313|EMBL:KFI48490.1}; TaxID=78343 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium boum.;"
hypothetical protein
cn_combo_scaffold_166_8
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10070..10774)
DNA (705bp) protein (235aa)
hypothetical protein id=12556831 bin=CNBR_ACIDO species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein {ECO:0000313|EMBL:GAM02313.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas p
hypothetical protein
cn_combo_scaffold_166_9
unknown

Not on your lists

11341..11490
DNA (150bp) protein (50aa)

This feature has no annotations

cn_combo_scaffold_166_10
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11497..11817)
DNA (321bp) protein (107aa)
CRISPR-associated protein Cas2 id=12556832 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
CRISPR-associated protein Cas2 Tax=RBG_16_Deltaproteobacteria_71_12_curated
CRISPR-associated protein Cas2
cn_combo_scaffold_166_11
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11814..12689)
DNA (876bp) protein (292aa)
CRISPR-associated protein Cas1; K15342 CRISP-associated protein Cas1 id=12556833 bin=CNBR_ACIDO species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
CRISPR-associated protein Cas1; K15342 CRISP-associated protein Cas1 Tax=RBG_16_Deltaproteobacteria_71_12_curated
CRISPR-associated protein Cas1
cn_combo_scaffold_166_12
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12691..13452)
DNA (762bp) protein (254aa)
CRISPR-associated protein, Cse3 family id=12556834 bin=CNBR_ACIDO species=Sphingomonas sp. Mn802worker genus=Sphingomonas taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
CRISPR-associated protein, Cse3 family Tax=RBG_16_Deltaproteobacteria_71_12_curated
CRISPR-associated protein, Cse3 family
cn_combo_scaffold_166_13
Aminomonas paucivorans, Aminomonas, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(13449..14060)
DNA (612bp) protein (204aa)
CRISPR-associated protein Cas5 family id=12556835 bin=CNBR_ACIDO species=Aminomonas paucivorans genus=Aminomonas taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
CRISPR-associated protein, Cas5e family {ECO:0000313|EMBL:EFQ22977.1}; TaxID=584708 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminomonas.;" source="Aminomonas pauci
CRISPR-associated protein, Cas5e family
cn_combo_scaffold_166_14
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(14117..15325)
DNA (1209bp) protein (403aa)
CRISPR-associated protein, Cse4 family id=12556836 bin=CNBR_ACIDO species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
CRISPR-associated protein, Cse4 family
CRISPR-associated protein, Cse4 family {ECO:0000313|EMBL:ACZ40834.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaero
cn_combo_scaffold_166_15
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(15342..15854)
DNA (513bp) protein (171aa)
CRISPR-associated protein, Cse2 family n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAJ2_SPHTD
CRISPR-associated protein, Cse2 family
CRISPR-associated protein, Cse2 family {ECO:0000313|EMBL:ACZ40835.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaero
cn_combo_scaffold_166_16
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15851..17356)
DNA (1506bp) protein (502aa)
id=12556837 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein {ECO:0000313|EMBL:AJY71729.1}; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurredu
hypothetical protein
cn_combo_scaffold_166_17
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(17362..20154)
DNA (2793bp) protein (931aa)
CRISPR-associated helicase Cas3; K07012 id=12556838 bin=CNBR_ACIDO species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
CRISPR-associated helicase Cas3
CRISPR-associated helicase Cas3 {ECO:0000313|EMBL:ACZ42801.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
cn_combo_scaffold_166_18
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20333..21352)
DNA (1020bp) protein (340aa)
regulatory protein, DeoR id=12556840 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP68540.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
regulatory protein, DeoR
cn_combo_scaffold_166_19
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(21467..21982)
DNA (516bp) protein (172aa)
lipoprotein id=12556841 bin=CNBR_ACIDO species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:AFN75750.1}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter rose
cn_combo_scaffold_166_20
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

22084..23067
DNA (984bp) protein (328aa)
hypothetical protein id=12556842 bin=CNBR_ACIDO species=Terriglobus saanensis genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV82609.1}; Flags: Precursor;; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanens
cn_combo_scaffold_166_21
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

23097..23804
DNA (708bp) protein (236aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
pnbA; carboxylesterase id=12556843 bin=CNBR_ACIDO species=Gloeobacter kilaueensis genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
pnbA; carboxylesterase
cn_combo_scaffold_166_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23817..25421)
DNA (1605bp) protein (535aa)
drug resistance transporter, EmrB/QacA subfamily id=12556844 bin=CNBR_ACIDO species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
drug resistance transporter, EmrB/QacA subfamily
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:AHG89972.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_166_23
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(25438..26673)
DNA (1236bp) protein (412aa)
secretion protein HlyD family protein; K03543 multidrug resistance protein A id=12556845 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
secretion protein HlyD family protein; K03543 multidrug resistance protein A Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
secretion protein HlyD family protein
cn_combo_scaffold_166_24
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(26673..28061)
DNA (1389bp) protein (463aa)
outer membrane efflux protein id=12556846 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ABF42097.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Kor
cn_combo_scaffold_166_25
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(28058..28639)
DNA (582bp) protein (194aa)
TetR family transcriptional regulator id=12556847 bin=CNBR_ACIDO species=Aminobacterium colombiense genus=Aminobacterium taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
transcriptional regulator, TetR family Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
Transcriptional regulator, TetR family
cn_combo_scaffold_166_26
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

28885..29442
DNA (558bp) protein (186aa)
hypothetical protein id=12556848 bin=CNBR_ACIDO species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
cn_combo_scaffold_166_27
CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, Acidobacteria, Bacteria

Not on your lists

comp(29604..30203)
DNA (600bp) protein (200aa)
id=12556849 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12556849 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cn_combo_scaffold_166_28
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

30607..33087
DNA (2481bp) protein (827aa)
ComE-like competence protein; K02238 competence protein ComEC id=12556850 bin=CNBR_ACIDO species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Metallo-beta-lactamase superfamily Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ComE-like competence protein
cn_combo_scaffold_166_29
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(32978..33856)
DNA (879bp) protein (293aa)
MazG family protein; K04765 ATP diphosphatase [EC:3.6.1.8] id=12556851 bin=CNBR_ACIDO species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
nucleoside triphosphate pyrophosphohydrolase; K04765 ATP diphosphatase [EC:3.6.1.8] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
MazG family protein
cn_combo_scaffold_166_30
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

34080..34898
DNA (819bp) protein (273aa)
beta-lactamase domain-containing protein; K06167 PhnP protein id=12556852 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
beta-lactamase domain-containing protein; K06167 PhnP protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
beta-lactamase domain-containing protein
Displaying items 1-30 of 211 in total

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