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cn_combo_scaffold_428

Alias: ACIDO32_15

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_428_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(1..1353)
DNA (1353bp) protein (451aa)
FecR protein id=12555120 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
putative transmembrane protein
cn_combo_scaffold_428_2
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

1503..3404
DNA (1902bp) protein (634aa)
chaperone protein DnaK id=12555121 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
dnaK; molecular chaperone DnaK; K04043 molecular chaperone DnaK Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
chaperone protein DnaK
cn_combo_scaffold_428_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

3414..4502
DNA (1089bp) protein (363aa)
dnaJ1; chaperone protein DnaJ; K03686 molecular chaperone DnaJ id=12555122 bin=CNBR_ACIDO species=Corynebacterium ulceribovis genus=Corynebacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
dnaJ; chaperone protein dnaJ, heat shock protein (Hsp40), co-chaperone with dnaK Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
dnaJ1; chaperone protein DnaJ
cn_combo_scaffold_428_4
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

4616..5059
DNA (444bp) protein (148aa)
MerR family transcriptional regulator; K13640 MerR family transcriptional regulator, heat shock protein HspR id=12555123 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
merR; MerR family transcriptional regulator; K13640 MerR family transcriptional regulator, heat shock protein HspR Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
MerR family transcriptional regulator
cn_combo_scaffold_428_5
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

5105..5971
DNA (867bp) protein (289aa)
DNA replication protein, DNAC-like; K02315 DNA replication protein DnaC id=12555124 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA replication protein, DNAC-like; K02315 DNA replication protein DnaC Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
DNA replication protein, DNAC-like
cn_combo_scaffold_428_6
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

5982..7133
DNA (1152bp) protein (384aa)
oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] id=12555125 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
cn_combo_scaffold_428_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

7242..7814
DNA (573bp) protein (191aa)
id=12555126 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12555126 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
cn_combo_scaffold_428_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

7921..8361
DNA (441bp) protein (147aa)
id=12555127 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12555127 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
cn_combo_scaffold_428_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(8398..8874)
DNA (477bp) protein (159aa)
id=12555128 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12555128 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
cn_combo_scaffold_428_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

8944..10305
DNA (1362bp) protein (454aa)
lysine arginine ornithine transport system kinase; K07588 LAO/AO transport system kinase [EC:2.7.-.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
argK; LAO/AO transport system kinase id=12555129 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
LAO/AO transport system kinase
cn_combo_scaffold_428_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

10298..11143
DNA (846bp) protein (282aa)
hypothetical protein id=12555130 bin=CNBR_ACIDO species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
cn_combo_scaffold_428_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

11186..12064
DNA (879bp) protein (293aa)
methylthioadenosine phosphorylase; K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] id=12555131 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
methylthioadenosine phosphorylase; K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
methylthioadenosine phosphorylase
cn_combo_scaffold_428_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

12165..13103
DNA (939bp) protein (313aa)
adoK; adenosine kinase (EC:2.7.1.20); K00856 adenosine kinase [EC:2.7.1.20] id=12555132 bin=CNBR_ACIDO species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
adoK; adenosine kinase (EC:2.7.1.20); K00856 adenosine kinase [EC:2.7.1.20] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
adoK; adenosine kinase (EC:2.7.1.20)
cn_combo_scaffold_428_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

13123..13566
DNA (444bp) protein (148aa)
hypothetical protein id=12555133 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
cn_combo_scaffold_428_15
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

13624..14016
DNA (393bp) protein (131aa)
hypothetical protein id=12555134 bin=CNBR_ACIDO species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
cn_combo_scaffold_428_16
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

14013..14186
DNA (174bp) protein (58aa)
id=12555135 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12555135 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
cn_combo_scaffold_428_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

14285..14629
DNA (345bp) protein (115aa)
hypothetical protein id=12555136 bin=CNBR_ACIDO species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
VanZ family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
cn_combo_scaffold_428_18
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

14645..15082
DNA (438bp) protein (146aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9); K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
ribH; 6,7-dimethyl-8-ribityllumazine synthase id=12555137 bin=CNBR_ACIDO species=Spiribacter salinus genus=Spiribacter taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ribH; 6,7-dimethyl-8-ribityllumazine synthase
cn_combo_scaffold_428_19
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

15079..15525
DNA (447bp) protein (149aa)
NusB antitermination factor; K03625 N utilization substance protein B id=12555138 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
NusB antitermination factor; K03625 N utilization substance protein B Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
NusB antitermination factor
cn_combo_scaffold_428_20
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

15536..17095
DNA (1560bp) protein (520aa)
lysS; Lysyl-tRNA synthetase (LysRS) (EC:6.1.1.6) id=12555139 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
lysS; Lysyl-tRNA synthetase (LysRS) (EC:6.1.1.6)
cn_combo_scaffold_428_21
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

17100..18335
DNA (1236bp) protein (412aa)
lipoprotein releasing system transmembrane protein LolC/E family; K09808 lipoprotein-releasing system permease protein id=12555140 bin=CNBR_ACIDO species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
lipoprotein releasing system transmembrane protein LolC/E family; K09808 lipoprotein-releasing system permease protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
lipoprotein releasing system transmembrane protein LolC/E family
cn_combo_scaffold_428_22
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

18338..19060
DNA (723bp) protein (241aa)
phosphonate-transporting ATPase (EC:3.6.3.28) id=12555141 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ABC transporter; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
phosphonate-transporting ATPase (EC:3.6.3.28)
cn_combo_scaffold_428_23
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19213..19905
DNA (693bp) protein (231aa)
hypothetical protein id=12555142 bin=CNBR_ACIDO species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC46583.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
cn_combo_scaffold_428_24
CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, Acidobacteria, Bacteria

Not on your lists

19932..20432
DNA (501bp) protein (167aa)
id=12555143 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12555143 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cn_combo_scaffold_428_25
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20463..23093
DNA (2631bp) protein (877aa)
cckA; PAS/PAC sensor hybrid histidine kinase id=12555144 bin=CNBR_ACIDO species=Actinoplanes sp. N902-109 genus=Actinoplanes taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cckA; PAS/PAC sensor hybrid histidine kinase
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:AGL17753.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N9
cn_combo_scaffold_428_26
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

23191..25632
DNA (2442bp) protein (814aa)
ATPase; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC id=12555145 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
clpC; ATP-dependent Clp protease, ATP-binding subunit ClpC; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ATPase
cn_combo_scaffold_428_27
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

25647..28304
DNA (2658bp) protein (886aa)
surface antigen (D15) id=12555146 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
surface antigen (D15) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
surface antigen (D15)
cn_combo_scaffold_428_28
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(28388..29026)
DNA (639bp) protein (213aa)
id=12555147 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12555147 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
cn_combo_scaffold_428_29
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

29354..29953
DNA (600bp) protein (200aa)
outer membrane protein id=12555148 bin=CNBR_ACIDO species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
outer membrane chaperone Skp; K06142 outer membrane protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
outer membrane chaperone Skp (OmpH)
cn_combo_scaffold_428_30
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

30041..31306
DNA (1266bp) protein (422aa)
acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129); K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] id=12555149 bin=CNBR_ACIDO species=Ceratitis capitata genus=Ceratitis taxon_order=Diptera taxon_class=Insecta phylum=Arthropoda tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129); K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
Displaying items 1-30 of 85 in total

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