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cn_combo_scaffold_1119

Alias: ACIDO32_26

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Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1119_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(78..1145)
DNA (1068bp) protein (356aa)
hypothetical protein id=12557805 bin=CNBR_ACIDO species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
cn_combo_scaffold_1119_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

1626..3374
DNA (1749bp) protein (583aa)
putative ABC transporter ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] id=12557804 bin=CNBR_ACIDO species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative ABC transporter ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
ABC transporter transmembrane region
cn_combo_scaffold_1119_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

3384..5057
DNA (1674bp) protein (558aa)
putative ABC transporter ATP-binding protein id=12557803 bin=CNBR_ACIDO species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
heme ABC transporter ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
putative ABC transporter ATP-binding protein
cn_combo_scaffold_1119_4
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

5138..5395
DNA (258bp) protein (86aa)
id=12557802 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12557802 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
cn_combo_scaffold_1119_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(5522..6541)
DNA (1020bp) protein (340aa)
ddlA; d-alanine-d-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] id=12557801 bin=CNBR_ACIDO species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ddlA; d-alanine-d-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ddlA; d-alanine-d-alanine ligase (EC:6.3.2.4)
cn_combo_scaffold_1119_6
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6559..7485)
DNA (927bp) protein (309aa)
ser/thr protein phosphatase family protein id=12557800 bin=CNBR_ACIDO species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ser/thr protein phosphatase family protein
Phosphoesterase {ECO:0000313|EMBL:EAU63276.1}; Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:ADO72672.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcal
cn_combo_scaffold_1119_7

Not on your lists

comp(7547..8287)
DNA (741bp) protein (247aa)
4'-phosphopantetheinyl transferase; K06133 4'-phosphopantetheinyl transferase [EC:2.7.8.-] id=12557799 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein {ECO:0000313|EMBL:KKN80278.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
4'-phosphopantetheinyl transferase
cn_combo_scaffold_1119_8
RifOxyA12_full_Deltaproteobacteria_61_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8360..9214
DNA (855bp) protein (285aa)
baeC; Polyketide biosynthesis malonyl CoA-acyl carrier protein transacylase BaeC (EC:2.3.1.39) Tax=RifOxyA12_full_Deltaproteobacteria_61_11_curated
ozmM; malonyl CoA-ACP transferase (OzmM) id=12557798 bin=CNBR_ACIDO species=Methylosinus trichosporium genus=Methylosinus taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
cn_combo_scaffold_1119_9
CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, Acidobacteria, Bacteria

Not on your lists

comp(9701..9970)
DNA (270bp) protein (90aa)
id=12557797 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12557797 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cn_combo_scaffold_1119_10
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(9967..10554)
DNA (588bp) protein (196aa)
ECF subfamily RNA polymerase sigma-24 factor id=12557796 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative RNA polymerase sigma-E factor (Sigma-24); K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
ECF subfamily RNA polymerase sigma-24 factor
cn_combo_scaffold_1119_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

10647..11891
DNA (1245bp) protein (415aa)
outer membrane efflux protein id=12557795 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
outer membrane efflux protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
outer membrane efflux protein
cn_combo_scaffold_1119_12
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

11988..13193
DNA (1206bp) protein (402aa)
RND family efflux transporter MFP subunit id=12557794 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RND family efflux transporter MFP subunit Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
RND family efflux transporter MFP subunit
cn_combo_scaffold_1119_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

13190..16351
DNA (3162bp) protein (1054aa)
acriflavin resistance protein id=12557793 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Armatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
acriflavin resistance protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
acriflavin resistance protein
cn_combo_scaffold_1119_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

16513..16722
DNA (210bp) protein (70aa)
hypothetical protein id=12557792 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Protein of unknown function (DUF2892) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
cn_combo_scaffold_1119_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(16786..17883)
DNA (1098bp) protein (366aa)
serine phosphatase id=12557791 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
serine phosphatase
Serine phosphatase {ECO:0000313|EMBL:ABF42986.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ell
cn_combo_scaffold_1119_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

18400..21525
DNA (3126bp) protein (1042aa)
TPR repeat-containing protein id=12557790 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:ABF42006.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="
cn_combo_scaffold_1119_17
CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, Acidobacteria, Bacteria

Not on your lists

21522..22193
DNA (672bp) protein (224aa)
id=12557789 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12557789 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cn_combo_scaffold_1119_18
CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, Acidobacteria, Bacteria

Not on your lists

22172..22336
DNA (165bp) protein (55aa)
id=12557788 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12557788 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cn_combo_scaffold_1119_19
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

22413..22952
DNA (540bp) protein (180aa)
RBBP; Putative esterase (EC:3.-.-.-)
esterase; K07002 id=12557787 bin=CNBR_ACIDO species=Endozoicomonas elysicola genus=Endozoicomonas taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
esterase; K07002 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
cn_combo_scaffold_1119_20
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

22984..23547
DNA (564bp) protein (188aa)
LemA family protein; K03744 LemA protein id=12557786 bin=CNBR_ACIDO species=Rhizobium sp. genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein; K03744 LemA protein Tax=RBG_16_RIF_WS3X_71_46_curated
LemA family protein
cn_combo_scaffold_1119_21
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

23574..25334
DNA (1761bp) protein (587aa)
hypothetical protein id=12557785 bin=CNBR_ACIDO species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein
cn_combo_scaffold_1119_22
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25375..25878)
DNA (504bp) protein (168aa)
GCN5-like N-acetyltransferase id=12557784 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
N-acetyltransferase GCN5 {ECO:0000313|EMBL:ESW86185.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp
GCN5-like N-acetyltransferase
cn_combo_scaffold_1119_23
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(25875..26159)
DNA (285bp) protein (95aa)
hypothetical protein id=12557783 bin=CNBR_ACIDO species=Sphingobium japonicum genus=Sphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
cn_combo_scaffold_1119_24
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(26880..27527)
DNA (648bp) protein (216aa)
hypothetical protein id=12557781 bin=CNBR_ACIDO species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ40459.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" sourc
cn_combo_scaffold_1119_25
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

27680..28534
DNA (855bp) protein (285aa)
glnR; GlnR family transcriptional regulator id=12557780 bin=CNBR_ACIDO species=Bifidobacterium magnum genus=Bifidobacterium taxon_order=Bifidobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative phosphate regulon transcriptional regulatory protein PhoB; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=RIFCSPLOWO2_02_FULL_Acidobacter
response regulator
cn_combo_scaffold_1119_26

Not on your lists

28740..29411
DNA (672bp) protein (224aa)
hypothetical protein id=12557779 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Marine sediment metagenome DNA, contig: S12H4_S00572 {ECO:0000313|EMBL:GAI82068.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
cn_combo_scaffold_1119_27
CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, Acidobacteria, Bacteria

Not on your lists

29497..30027
DNA (531bp) protein (177aa)
id=12557778 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12557778 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cn_combo_scaffold_1119_28
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

30064..30300
DNA (237bp) protein (79aa)
hypothetical protein id=12557777 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
cn_combo_scaffold_1119_29
CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, Acidobacteria, Bacteria

Not on your lists

comp(30487..30834)
DNA (348bp) protein (116aa)
id=12557776 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12557776 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cn_combo_scaffold_1119_30
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31016..31879)
DNA (864bp) protein (288aa)
transposase B id=12557775 bin=CNBR_ACIDO species=Burkholderia pseudomallei genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
transposase B
Transposase B {ECO:0000313|EMBL:ABN88699.1}; TaxID=357348 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkhold
Displaying items 1-30 of 81 in total

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