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cn_combo_scaffold_1426

Alias: ACIDO32_30

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1426_1
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63..317)
DNA (255bp) protein (85aa)
hydrolase; K07025 putative hydrolase of the HAD superfamily id=12556822 bin=CNBR_ACIDO species=Rhizobium sp. AP16 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
HAD family hydrolase {ECO:0000313|EMBL:KDP75545.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensi
hydrolase
cn_combo_scaffold_1426_2
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(478..1743)
DNA (1266bp) protein (422aa)
esterase; K07214 enterochelin esterase and related enzymes id=12556821 bin=CNBR_ACIDO species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
esterase; K07214 enterochelin esterase and related enzymes Tax=RBG_13_Planctomycetes_50_24_curated
esterase
cn_combo_scaffold_1426_3
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(1973..3121)
DNA (1149bp) protein (383aa)
iron-containing alcohol dehydrogenase id=12556819 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
iron-containing alcohol dehydrogenase
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:ACB73544.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM
cn_combo_scaffold_1426_4
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3190..3495)
DNA (306bp) protein (102aa)
antibiotic biosynthesis monooxygenase id=12556818 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:CDI03096.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candi
antibiotic biosynthesis monooxygenase
cn_combo_scaffold_1426_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(3492..4010)
DNA (519bp) protein (173aa)
ferroxidase (EC:1.16.3.1); K02217 ferritin [EC:1.16.3.1] id=12556817 bin=CNBR_ACIDO species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ferroxidase; K02217 ferritin [EC:1.16.3.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ferroxidase (EC:1.16.3.1)
cn_combo_scaffold_1426_6
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(4187..5251)
DNA (1065bp) protein (355aa)
fructose-bisphosphate aldolase; K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] id=12556816 bin=CNBR_ACIDO species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
fbaB; Fructose-1,6-bisphosphate aldolase; K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
fructose-bisphosphate aldolase
cn_combo_scaffold_1426_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

5470..6687
DNA (1218bp) protein (406aa)
hypothetical protein id=12556815 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Calcium-binding EF-hand-containing protein {ECO:0000313|EMBL:ABJ84897.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus So
cn_combo_scaffold_1426_8
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(6693..8279)
DNA (1587bp) protein (529aa)
Fis family transcriptional regulator id=12556814 bin=CNBR_ACIDO species=Brevibacillus borstelensis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Fis family transcriptional regulator
cn_combo_scaffold_1426_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

8490..9650
DNA (1161bp) protein (387aa)
secretion protein HlyD; K03585 membrane fusion protein id=12556813 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
secretion protein HlyD
Secretion protein HlyD {ECO:0000313|EMBL:ABF43070.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain
cn_combo_scaffold_1426_10
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9655..12798
DNA (3144bp) protein (1048aa)
hydrophobe/amphiphile efflux-1 (HAE1) family transporter; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family id=12556812 bin=CNBR_ACIDO species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter {ECO:0000313|EMBL:EMG36897.1}; Flags: Precursor;; TaxID=1262666 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Des
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
cn_combo_scaffold_1426_11
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

12795..14198
DNA (1404bp) protein (468aa)
RND efflux system, outer membrane lipoprotein, NodT id=12556811 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RND efflux system, outer membrane lipoprotein, NodT Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
RND efflux system, outer membrane lipoprotein, NodT
cn_combo_scaffold_1426_12
CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, Acidobacteria, Bacteria

Not on your lists

14223..14465
DNA (243bp) protein (81aa)
id=12556810 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12556810 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cn_combo_scaffold_1426_13
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

14728..16293
DNA (1566bp) protein (522aa)
WD40 domain-containing protein id=12556809 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
WD40 domain-containing protein
WD40 domain protein beta Propeller {ECO:0000313|EMBL:ACB77602.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus te
cn_combo_scaffold_1426_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(16475..19198)
DNA (2724bp) protein (908aa)
macrolide transporter ATP-binding/permease protein id=12556808 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
macrolide transporter ATP-binding/permease protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
permease
cn_combo_scaffold_1426_15
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19440..20543
DNA (1104bp) protein (368aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54); K01626 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] id=12556807 bin=CNBR_ACIDO species=Leeia oryzae genus=Leeia taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
aroF; phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54); K01626 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
cn_combo_scaffold_1426_16
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20628..22016)
DNA (1389bp) protein (463aa)
D-2-hydroxyglutarate dehydrogenase (EC:1.1.99.2)
D-2-hydroxyglutarate dehydrogenase {ECO:0000313|EMBL:CDM24184.1}; EC=1.1.99.2 {ECO:0000313|EMBL:CDM24184.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alca
Oxidoreductase, FAD linked, C-terminal domain protein id=12556806 bin=CNBR_ACIDO species=unknown genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cn_combo_scaffold_1426_17
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

22075..23808
DNA (1734bp) protein (578aa)
hypothetical protein id=12556805 bin=CNBR_ACIDO species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
cn_combo_scaffold_1426_18
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(23831..24874)
DNA (1044bp) protein (348aa)
DAHP synthetase I/KDSA; K03856 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] id=12556804 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DAHP synthetase I/KDSA
DAHP synthetase I/KDSA {ECO:0000313|EMBL:ACB77027.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1
cn_combo_scaffold_1426_19
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

24999..25496
DNA (498bp) protein (166aa)
hypothetical protein id=12556803 bin=CNBR_ACIDO species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DinB family protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein
cn_combo_scaffold_1426_20
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(25509..26309)
DNA (801bp) protein (267aa)
id=12556802 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12556802 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
cn_combo_scaffold_1426_21
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(26478..27338)
DNA (861bp) protein (287aa)
xylose isomerase domain-containing protein id=12556801 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
xylose isomerase domain-containing protein
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ABJ86000.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus So
cn_combo_scaffold_1426_22
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(27346..27939)
DNA (594bp) protein (198aa)
hypothetical protein id=12556800 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein; K05803 lipoprotein NlpI Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
cn_combo_scaffold_1426_23
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

28219..29061
DNA (843bp) protein (281aa)
hypothetical protein id=12556799 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB75192.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strai
cn_combo_scaffold_1426_24
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(29168..30619)
DNA (1452bp) protein (484aa)
Sensor protein (EC:2.7.13.3) id=12556798 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Sensor protein (EC:2.7.13.3) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Sensor protein (EC:2.7.13.3)
cn_combo_scaffold_1426_25
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(30616..31299)
DNA (684bp) protein (228aa)
OmpR family two-component response regulator id=12556797 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
two component transcriptional regulator, winged helix family; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR Tax=RIFCSPLOWO2_02_FULL_Acidobacteri
Two-component transcriptional regulator, CheY-like receiver domain
cn_combo_scaffold_1426_26
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(31280..34414)
DNA (3135bp) protein (1045aa)
cation efflux protein id=12556796 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cation efflux protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
cation efflux protein
cn_combo_scaffold_1426_27
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(34417..35628)
DNA (1212bp) protein (404aa)
efflux transporter RND family, MFP subunit; K15727 cobalt-zinc-cadmium resistance protein CzcB id=12556795 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cusB; Secretion protein of the copper-transporting efflux system CusCFBA Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
efflux transporter RND family, MFP subunit
cn_combo_scaffold_1426_28
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(35625..36185)
DNA (561bp) protein (187aa)
id=12556794 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
outer membrane efflux protein; K15725 cobalt-zinc-cadmium resistance protein CzcC Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Displaying 28 items

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