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cn_combo_scaffold_1686

Alias: ACIDO32_32

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1686_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(1..231)
DNA (231bp) protein (77aa)
hypothetical protein id=12556115 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ82956.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
cn_combo_scaffold_1686_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(659..4345)
DNA (3687bp) protein (1229aa)
hypothetical protein id=12556116 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein {ECO:0000313|EMBL:ABJ82956.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
hypothetical protein
cn_combo_scaffold_1686_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(4532..5182)
DNA (651bp) protein (217aa)
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain id=12556117 bin=CNBR_ACIDO species=Terriglobus roseus genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
LuxR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
cn_combo_scaffold_1686_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(5194..6642)
DNA (1449bp) protein (483aa)
histidine kinase id=12556118 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
integral membrane sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
histidine kinase
cn_combo_scaffold_1686_5
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6973..7194
DNA (222bp) protein (74aa)
CsbD-like family protein 2 id=12556119 bin=CNBR_ACIDO species=Singularimonas variicoloris genus=Singularimonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein {ECO:0000313|EMBL:KGM49120.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22I
general stress protein CsbD
cn_combo_scaffold_1686_6
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7243..7815)
DNA (573bp) protein (191aa)
hypothetical protein id=12556120 bin=CNBR_ACIDO species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Chemotaxis protein methyltransferase CheR {ECO:0000313|EMBL:AKF10101.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.
hypothetical protein
cn_combo_scaffold_1686_7
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

8211..9200
DNA (990bp) protein (330aa)
diacylglycerol kinase catalytic region id=12556121 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
diacylglycerol kinase catalytic region
Diacylglycerol kinase catalytic region {ECO:0000313|EMBL:AFZ37340.1}; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (strain ATCC 29371 / PC
cn_combo_scaffold_1686_8
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(9181..10092)
DNA (912bp) protein (304aa)
hypothetical protein id=12556122 bin=CNBR_ACIDO species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein Tax=RBG_13_Planctomycetes_50_24_curated
hypothetical protein
cn_combo_scaffold_1686_9
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10118..11284)
DNA (1167bp) protein (389aa)
oxidoreductase domain protein id=12556123 bin=CNBR_ACIDO species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Oxidoreductase domain protein {ECO:0000313|EMBL:CCH54890.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
oxidoreductase domain protein
cn_combo_scaffold_1686_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(11427..11663)
DNA (237bp) protein (79aa)
hypothetical protein id=12556124 bin=CNBR_ACIDO species=Caldimonas manganoxidans genus=Caldimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
cn_combo_scaffold_1686_11
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11717..13321)
DNA (1605bp) protein (535aa)
alkaline phosphatase (EC:3.1.3.1); K01113 alkaline phosphatase D [EC:3.1.3.1] id=12556125 bin=CNBR_ACIDO species=Caulobacter sp. genus=Caulobacter taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
alkaline phosphatase (EC:3.1.3.1)
Alkaline phosphatase {ECO:0000313|EMBL:ABZ70872.1}; EC=3.1.3.1 {ECO:0000313|EMBL:ABZ70872.1};; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales;
cn_combo_scaffold_1686_12
CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, Acidobacteria, Bacteria

Not on your lists

13576..13848
DNA (273bp) protein (91aa)
id=12556126 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12556126 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cn_combo_scaffold_1686_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

13906..14940
DNA (1035bp) protein (345aa)
O-methyltransferase family protein id=12556127 bin=CNBR_ACIDO species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
O-methyltransferase family 2 {ECO:0000313|EMBL:EDY15927.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
O-methyltransferase family protein
cn_combo_scaffold_1686_14
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(15092..15508)
DNA (417bp) protein (139aa)
DinB family protein id=12556128 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
DinB family protein
cn_combo_scaffold_1686_15
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15841..17124
DNA (1284bp) protein (428aa)
hypothetical protein; K04046 hypothetical chaperone protein id=12556129 bin=CNBR_ACIDO species=Parvibaculum lavamentivorans genus=Parvibaculum taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS61647.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivor
cn_combo_scaffold_1686_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(17134..17649)
DNA (516bp) protein (172aa)
Putative uncharacterized protein id=12556130 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Putative uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
cn_combo_scaffold_1686_17
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

17933..18775
DNA (843bp) protein (281aa)
hypothetical protein id=12556131 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF91867.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
cn_combo_scaffold_1686_18
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

18772..19413
DNA (642bp) protein (214aa)
hypothetical protein id=12556132 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
SAM-dependent methlyltransferase
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:EIQ00128.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacte
cn_combo_scaffold_1686_19
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

comp(19462..20391)
DNA (930bp) protein (310aa)
Xylose isomerase domain protein TIM barrel id=12556133 bin=CNBR_ACIDO species=Rudanella lutea genus=Rudanella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
xylose isomerase domain-containing protein Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
Xylose isomerase domain protein TIM barrel
cn_combo_scaffold_1686_20
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20515..21012
DNA (498bp) protein (166aa)
protein tyrosine phosphatase; K01104 protein-tyrosine phosphatase [EC:3.1.3.48] id=12556134 bin=CNBR_ACIDO species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
protein tyrosine phosphatase
Protein tyrosine phosphatase {ECO:0000313|EMBL:ACY16091.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Halia
cn_combo_scaffold_1686_21
CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, Acidobacteria, Bacteria

Not on your lists

21009..21371
DNA (363bp) protein (121aa)
id=12556135 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12556135 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cn_combo_scaffold_1686_22
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21509..21856)
DNA (348bp) protein (116aa)
HU family DNA-binding protein id=12556136 bin=CNBR_ACIDO species=Cellvibrio japonicus genus=Cellvibrio taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
HU family DNA-binding protein
DNA-binding protein HU family {ECO:0000313|EMBL:ACE85027.1}; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio ja
cn_combo_scaffold_1686_23
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

22081..22731
DNA (651bp) protein (217aa)
hypothetical protein id=12556137 bin=CNBR_ACIDO species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein Tax=RBG_16_Chloroflexi_63_12_curated
YceI family protein
cn_combo_scaffold_1686_24
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

22795..23715
DNA (921bp) protein (307aa)
aguB; N-carbamoylputrescine amidohydrolase (EC:3.5.1.53); K12251 N-carbamoylputrescine amidase [EC:3.5.1.53] id=12556138 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
aguB; N-carbamoylputrescine amidohydrolase (EC:3.5.1.53); K12251 N-carbamoylputrescine amidase [EC:3.5.1.53] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
cn_combo_scaffold_1686_25
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

23712..24773
DNA (1062bp) protein (354aa)
aguA; agmatine deiminase (EC:3.5.3.12); K10536 agmatine deiminase [EC:3.5.3.12] id=12556139 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
aguA; agmatine deiminase (EC:3.5.3.12); K10536 agmatine deiminase [EC:3.5.3.12] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Porphyromonas-type peptidyl-arginine deiminase
cn_combo_scaffold_1686_26
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

24927..26135
DNA (1209bp) protein (403aa)
hypothetical protein id=12556140 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
delta-60 repeat domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
cn_combo_scaffold_1686_27
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(26142..28622)
DNA (2481bp) protein (827aa)
hypothetical protein id=12556141 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
cn_combo_scaffold_1686_28
CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, Acidobacteria, Bacteria

Not on your lists

28722..29042
DNA (321bp) protein (107aa)
id=12556142 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12556142 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cn_combo_scaffold_1686_29
Caldatribacterium saccharofermentans, Caldatribacterium, Atribacteria, Bacteria

Not on your lists

29109..29969
DNA (861bp) protein (287aa)
protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD id=12556143 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD Tax=Caldatribacterium saccharofermentans
protein-export membrane protein SecD
cn_combo_scaffold_1686_30
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

29966..31372
DNA (1407bp) protein (469aa)
secD; bifunctional preprotein translocase subunit SecD/SecF; K12257 SecD/SecF fusion protein id=12556144 bin=CNBR_ACIDO species=Martelella mediterranea genus=Martelella taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
protein-export membrane protein SecD; K12257 SecD/SecF fusion protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
secD; preprotein translocase subunit SecD
Displaying items 1-30 of 69 in total

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