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cn_combo_scaffold_1063

Alias: ACIDO32_36

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1063_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(55..645)
DNA (591bp) protein (197aa)
hypothetical protein id=12555315 bin=CNBR_ACIDO species=Vibrio sp. EJY3 genus=Vibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DSBA oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
DSBA oxidoreductase
cn_combo_scaffold_1063_2
unknown

Not on your lists

comp(822..1490)
DNA (669bp) protein (223aa)

This feature has no annotations

cn_combo_scaffold_1063_3
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

comp(1702..2643)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI000360D0EF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKC81616.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
cn_combo_scaffold_1063_4
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

2865..3542
DNA (678bp) protein (226aa)
PKHD-type hydroxylase ybiX n=2 Tax=unclassified Opitutaceae RepID=H1IR10_9BACT
Fe(II)-dependent oxygenase
Fe(II)-dependent oxygenase {ECO:0000313|EMBL:AHF90456.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
cn_combo_scaffold_1063_5
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(3786..6368)
DNA (2583bp) protein (861aa)
TonB-dependent siderophore receptor n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IR11_9BACT
catecholate siderophore receptor Fiu
Catecholate siderophore receptor Fiu {ECO:0000313|EMBL:AHF90457.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
cn_combo_scaffold_1063_6
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6776..7825
DNA (1050bp) protein (350aa)
Putative iron ABC transporter permease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACP2_GEMAT
putative iron ABC transporter permease rbh
Putative iron ABC transporter permease {ECO:0000313|EMBL:BAH40269.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurant
cn_combo_scaffold_1063_7
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

7822..8625
DNA (804bp) protein (268aa)
Putative iron ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACP1_GEMAT
putative iron ABC transporter ATP-binding protein
Putative iron ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAH40268.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatim
cn_combo_scaffold_1063_8
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

8600..9463
DNA (864bp) protein (288aa)
Putative exported protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACP0_GEMAT
hypothetical protein
Putative exported protein {ECO:0000313|EMBL:BAH40267.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain
cn_combo_scaffold_1063_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

9880..10863
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Mesoflavibacter zeaxanthinifaciens RepID=UPI000255B076
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ84221.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
cn_combo_scaffold_1063_10
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

10870..11757
DNA (888bp) protein (296aa)
creatininase; K01470 creatinine amidohydrolase [EC:3.5.2.10] id=14628802 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
creatininase; K01470 creatinine amidohydrolase [EC:3.5.2.10] Tax=CSP1_4_Chloroflexi
Creatininase
cn_combo_scaffold_1063_11
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(11790..12569)
DNA (780bp) protein (260aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WT7_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ85878.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
cn_combo_scaffold_1063_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(12623..13585)
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000362B193
ApbE family lipoprotein
ApbE family lipoprotein {ECO:0000313|EMBL:ABJ87069.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
cn_combo_scaffold_1063_13
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(13684..14742)
DNA (1059bp) protein (353aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01TF0_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ87070.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
cn_combo_scaffold_1063_14
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(14746..16059)
DNA (1314bp) protein (438aa)
oxidoreductase n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003607706
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ABJ87071.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" s
cn_combo_scaffold_1063_15
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

16173..17108
DNA (936bp) protein (312aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02D23_SOLUE
xylose isomerase domain-containing protein
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ABJ81043.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus So
cn_combo_scaffold_1063_16
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17218..18336
DNA (1119bp) protein (373aa)
Iron ABC transporter substrate-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACN8_GEMAT
iron ABC transporter substrate-binding protein rbh
Iron ABC transporter substrate-binding protein {ECO:0000313|EMBL:BAH40265.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimona
cn_combo_scaffold_1063_17
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18379..19533
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00038182A0
40-residue YVTN family beta-propeller repeat-containing protein
40-residue YVTN family beta-propeller repeat protein {ECO:0000313|EMBL:ADH90609.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacterace
cn_combo_scaffold_1063_18
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19618..20790
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003668F6F
Putative isochorismate synthase DhbC {ECO:0000313|EMBL:EHL97690.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacterac
isochorismate synthase
cn_combo_scaffold_1063_19
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20787..22424
DNA (1638bp) protein (546aa)
2,3-dihydroxybenzoate-AMP ligase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A8S3_STAND
2,3-dihydroxybenzoate-AMP ligase
2,3-dihydroxybenzoate-AMP ligase {ECO:0000313|EMBL:ADH90607.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novell
cn_combo_scaffold_1063_20
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22425..23084
DNA (660bp) protein (220aa)
isochorismate hydrolase (EC:3.3.2.1)
Isochorismate hydrolase {ECO:0000313|EMBL:ACU97098.1}; EC=3.3.2.1 {ECO:0000313|EMBL:ACU97098.1};; TaxID=471857 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospo
isochorismatase n=1 Tax=Nocardiopsis valliformis RepID=UPI00037B62F3
cn_combo_scaffold_1063_21
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23081..23335
DNA (255bp) protein (85aa)
Aryl carrier domain protein n=1 Tax=Saccharomonospora azurea NA-128 RepID=H8GC61_9PSEU
Aryl carrier domain protein {ECO:0000313|EMBL:EHY87738.1}; TaxID=882081 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora azurea
isochorismatase
cn_combo_scaffold_1063_22
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23332..27306
DNA (3975bp) protein (1325aa)
Amino acid adenylation domain protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A8S0_STAND
Amino acid adenylation domain protein {ECO:0000313|EMBL:ADH90604.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya n
amino acid adenylation protein
cn_combo_scaffold_1063_23
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27303..28088
DNA (786bp) protein (262aa)
2,3-dihydroxybenzoate-2,3-dehydrogenase n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E23805
2,3-dihydroxybenzoate-2,3-dehydrogenase {ECO:0000313|EMBL:EZQ12628.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Ps
short-chain dehydrogenase/reductase SDR
cn_combo_scaffold_1063_24
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

28463..28837
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4J5A8_9DELT
SpoIID/LytB domain-containing protein; K06381 stage II sporulation protein D Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S23 ribosomal protein
cn_combo_scaffold_1063_25
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28965..30086)
DNA (1122bp) protein (374aa)
L-lactate dehydrogenase {ECO:0000313|EMBL:ELS26423.1}; EC=1.1.2.3 {ECO:0000313|EMBL:ELS26423.1};; TaxID=1149133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadacea
L-lactate dehydrogenase n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MK35_PSEPS
FMN-dependent alpha-hydroxy acid dehydrogenase
cn_combo_scaffold_1063_26

Not on your lists

comp(30083..31267)
DNA (1185bp) protein (395aa)
Putative peptidase family M20/M25/M40 n=1 Tax=uncultured marine microorganism HF4000_APKG7H23 RepID=B3T9U5_9ZZZZ
Putative peptidase family M20/M25/M40 {ECO:0000313|EMBL:ABZ09354.1}; TaxID=455551 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_APKG7H23.;"
Peptidase M20 domain-containing protein 2
cn_combo_scaffold_1063_27
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31267..32046)
DNA (780bp) protein (260aa)
FAD-binding protein n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI0002E55C8A
FAD-binding protein {ECO:0000313|EMBL:KJK21901.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
siderophore-interacting protein
cn_combo_scaffold_1063_28
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32202..33689
DNA (1488bp) protein (496aa)
succinate semialdehyde dehydrogenase (EC:1.2.1.16)
Succinate semialdehyde dehydrogenase {ECO:0000313|EMBL:AAZ65244.1}; EC=1.2.1.16 {ECO:0000313|EMBL:AAZ65244.1};; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Bur
Succinate semialdehyde dehydrogenase n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46NL0_CUPPJ
cn_combo_scaffold_1063_29
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33753..34514
DNA (762bp) protein (254aa)
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100) rbh
Short-chain dehydrogenase/reductase SDR n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12HD3_POLSJ
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABE42059.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polar
cn_combo_scaffold_1063_30
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34578..35333
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI000372D98D
Transcriptional regulator {ECO:0000313|EMBL:EKF08142.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospi
GntR family transcriptional regulator
Displaying items 1-30 of 42 in total

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