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cn_combo_scaffold_90_89

Organism: CN-SCN_Acidobacteria_32xOld

near complete RP 52 / 55 MC: 3 BSCG 48 / 51 MC: 1 ASCG 12 / 38
Location: comp(100130..101119)

Top 3 Functional Annotations

Value Algorithm Source
sigma-54 dependent transcriptional regulator id=12554374 bin=CNBR_ACIDO species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 330.0
  • Bit_score: 647
  • Evalue 8.50e-183
sigma-54 dependent transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.9
  • Coverage: 330.0
  • Bit_score: 455
  • Evalue 1.30e-125
  • rbh
Sigma-54 dependent transcriptional regulator {ECO:0000313|EMBL:CAN97032.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.9
  • Coverage: 330.0
  • Bit_score: 455
  • Evalue 6.70e-125

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 990
ATGGAACGAATCTGCGGGGATGCGTGTCGTGTCTGCGGCCTGGTGCCGATCGCGCCGGGCCTCAGCGGCACGACCCAGGTCATCGTGCGCAGCGACGCCATGCAGGCCGTCCTCAAACGTGCCTCCCGCTTCGCGGCGAGCGACGCCCCGGTCGCCGTGCTCGGCGAGACCGGCACCGGCAAGGAAGTGGTCGCACGCATCGTGCACGCCAATTCTCCGCGCGCCGCGCGTCCCTTCGTCGCCATCAACGTCGCCGCGCTCCCGGCCGACCTGCTCGAGTCCGAGCTGTTCGGGCATGGCAAGGGCGCGTTCACCGGCGCGGCCACGGCACGGCATGGCCTGTTCGAGGCCGCTGACGGCGGCACGCTCTTCCTCGACGAGATTGGCGACATGCCGCTGGCGCTCCAGGCCAAGCTGCTGCGCGCCCTGCAGGACGGCGAGATCCGGCGGGTCGGCGAGAGCCAGTCGTTCTCGGTCGACGTGCGCGTAGTGTGCGCCACGCACCGGGATCTCGCGCTGCGCGTGCGCGACGGCGCCTTTCGCGAAGATCTGCTCTACCGGCTGCGCGTGCTGACGCTCGACGTGCCCCCGCTGCGCGACAGGCGCGACGACATCCTGCCGCTGGCCTACCGCTTCCTCGCCGAGGAAGGGACAGCCGTGCGCGGGTTCACCCGCGCCGCGAAGAAGCGGCTCCTCGCGCACCACTGGCCGGGCAACGTCCGCGAACTGCAGAACGTCGTCAGGCACGGCGCCGCGCTGGCCACCACCGACGATGTCGACGAAGAGGATCTGCCCGACGAACTGACACGGGGCGTCGACCCCGCCACCTCGACCAGCCAGCCGCGCAACCTCAGGCCCCTGGCCGACGTCGAACGGGAACACATCCTGTACGTTCTCGACGCCTGCCAGGGATCCCAGTCAGAGGCGGCCCGCGTGCTCGGCCTGGCCCGCAACACGCTCTGGCGCAAGCTGCGCGAGTACGCGAAATAG
PROTEIN sequence
Length: 330
MERICGDACRVCGLVPIAPGLSGTTQVIVRSDAMQAVLKRASRFAASDAPVAVLGETGTGKEVVARIVHANSPRAARPFVAINVAALPADLLESELFGHGKGAFTGAATARHGLFEAADGGTLFLDEIGDMPLALQAKLLRALQDGEIRRVGESQSFSVDVRVVCATHRDLALRVRDGAFREDLLYRLRVLTLDVPPLRDRRDDILPLAYRFLAEEGTAVRGFTRAAKKRLLAHHWPGNVRELQNVVRHGAALATTDDVDEEDLPDELTRGVDPATSTSQPRNLRPLADVEREHILYVLDACQGSQSEAARVLGLARNTLWRKLREYAK*