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cn_combo_scaffold_354_53

Organism: CN-SCN_Acidobacteria_32xOld

near complete RP 52 / 55 MC: 3 BSCG 48 / 51 MC: 1 ASCG 12 / 38
Location: 66727..67494

Top 3 Functional Annotations

Value Algorithm Source
helix-turn-helix domain-containing protein id=12554966 bin=CNBR_ACIDO species=Amycolatopsis nigrescens genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 256.0
  • Bit_score: 508
  • Evalue 4.80e-141
Putative transcriptional regulator {ECO:0000313|EMBL:ELQ90438.1}; TaxID=1214915 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis similarity UNIPROT
DB: UniProtKB
  • Identity: 38.2
  • Coverage: 233.0
  • Bit_score: 131
  • Evalue 1.30e-27
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 36.6
  • Coverage: 232.0
  • Bit_score: 128
  • Evalue 2.90e-27

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Taxonomy

Mycobacterium smegmatis → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 768
ATGACGGGACGAGGACGGGAGAGAGCGGCACGCGGTGCTGGCCGCATGGTGGATCGATCTGCCGGGGACGGGGCGGGCACAGGTCCGGACGTCCGCGTCCACGTGGGCGTCAGCGAACTCGTGTACGTCGGCCCCGCACTCGGGATCCGCTCCCACAGCACGGCCGTTCCCAGGCTGTTGCTCGCCCTCGACGAGCCTTTTGTCCTGGTCGGCCCGGCGGCGTCCACCGCTCCCCTGCGGGCGCTCTACGTGCCAGCGCGGACGCGTCATGCGGTCGCCACGCCGGGGATCCGGTGGCTGGTCGTCTACCTGGAGCCGGGATCCCATCGAGACCGCGCGTGTCGCCATCGGGGTATCCCCGATCCCGACCGTCTGGTCCACCTCGCTCGAACGGGCCGCGTCCGGCACCTGCTCGACGCGATCGGGCCGGCGGGACGTCCATCCTCACCCACAGACGAAGTGATCACGCGGATGCTCAGGGAACCGGCCACGCGCGTCTCGGCGGCGGCGATGGCCGCCAGCGTGGGCCTGTCCCTGGCCCACTTCCTGCGAACGTTTACCGAGGACACGGGGACGACGTTCCGGTTGTTCGGCAGGTGGGTCCGATTGCTCGAAGCCACCCGCCTGGTGTCGGGCCGGACGCTCACCGAGACGGCGACGGATGCGGGGTTTGCCTCACCTTCGCACTTCAGCGATACCGTGCGCTGGGCCTTTGGTTTCACGGCCACCGAGCTACTCGCGACGGGCGTGCGTATCGAGCCGATCTGA
PROTEIN sequence
Length: 256
MTGRGRERAARGAGRMVDRSAGDGAGTGPDVRVHVGVSELVYVGPALGIRSHSTAVPRLLLALDEPFVLVGPAASTAPLRALYVPARTRHAVATPGIRWLVVYLEPGSHRDRACRHRGIPDPDRLVHLARTGRVRHLLDAIGPAGRPSSPTDEVITRMLREPATRVSAAAMAASVGLSLAHFLRTFTEDTGTTFRLFGRWVRLLEATRLVSGRTLTETATDAGFASPSHFSDTVRWAFGFTATELLATGVRIEPI*