ggKbase home page

cn_combo_scaffold_354

Alias: ACIDO32_12

Search features with annotation key words

Displaying items 31-60 of 118 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_354_31
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

39390..41288
-----------------
DNA (1899bp)
protein (633aa)
ABC transporter with duplicated ATPase domains id=12554944 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ABC transporter with duplicated ATPase domains
ABC transporter with duplicated ATPase domains {ECO:0000313|EMBL:CBE69256.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabili
cn_combo_scaffold_354_32
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(41340..41558)
-----------------
DNA (219bp)
protein (73aa)
id=12554945 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12554945 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
cn_combo_scaffold_354_33
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(41635..42984)
-----------------
DNA (1350bp)
protein (450aa)
putative M16B family peptidase id=12554946 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative M16B family peptidase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
peptidase M16 domain protein
cn_combo_scaffold_354_34
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(42981..44294)
-----------------
DNA (1314bp)
protein (438aa)
peptidase M16-like protein id=12554947 bin=CNBR_ACIDO species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
peptidase M16-like protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
peptidase M16-like protein
cn_combo_scaffold_354_35
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(44298..45377)
-----------------
DNA (1080bp)
protein (360aa)
ATP binding protein, Mrp-like protein; K03593 ATP-binding protein involved in chromosome partitioning id=12554948 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ATP binding protein, Mrp-like protein; K03593 ATP-binding protein involved in chromosome partitioning Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ATP binding protein, Mrp-like protein
cn_combo_scaffold_354_36
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(45628..46011)
-----------------
DNA (384bp)
protein (128aa)
hypothetical protein id=12554949 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical membrane protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
cn_combo_scaffold_354_37
CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, Acidobacteria, Bacteria

Not on your lists

comp(46017..46220)
-----------------
DNA (204bp)
protein (68aa)
id=12554950 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12554950 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cn_combo_scaffold_354_38
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(46311..46541)
-----------------
DNA (231bp)
protein (77aa)
id=12554951 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12554951 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
cn_combo_scaffold_354_39
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(46641..50018)
-----------------
DNA (3378bp)
protein (1126aa)
UvrD/REP helicase id=12554952 bin=CNBR_ACIDO species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
UvrD/REP helicase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
UvrD/REP helicase
cn_combo_scaffold_354_40
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(49990..52965)
-----------------
DNA (2976bp)
protein (992aa)
ATP-dependent nuclease subunit B-like protein id=12554953 bin=CNBR_ACIDO species=Methanoregula formicica genus=Methanoregula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ATP-dependent nuclease subunit B-like protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ATP-dependent nuclease subunit B-like protein
cn_combo_scaffold_354_41
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(52999..54450)
-----------------
DNA (1452bp)
protein (484aa)
id=12554954 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12554954 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
cn_combo_scaffold_354_42
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

54584..54832
-----------------
DNA (249bp)
protein (83aa)
id=12554955 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12554955 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
cn_combo_scaffold_354_43
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

54884..55882
-----------------
DNA (999bp)
protein (333aa)
putative NADPH quinone oxidoreductase id=12554956 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
quinone oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
quinone oxidoreductase
cn_combo_scaffold_354_44
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

55882..56889
-----------------
DNA (1008bp)
protein (336aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synth
yrdC1; translation factor; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein id=12554957 bin=CNBR_ACIDO species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
yrdC1; translation factor
cn_combo_scaffold_354_45
R_OD1_Kaiserbacteria_54_22, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(56905..57315)
-----------------
DNA (411bp)
protein (137aa)
hypothetical protein id=12554958 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_54_22_curated
hypothetical protein
cn_combo_scaffold_354_46
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(57315..58112)
-----------------
DNA (798bp)
protein (266aa)
DNA adenine methylase id=12554959 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA adenine methylase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
DNA adenine methylase
cn_combo_scaffold_354_47
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(58152..59738)
-----------------
DNA (1587bp)
protein (529aa)
hypothetical protein; K07028 id=12554960 bin=CNBR_ACIDO species=Phaeospirillum fulvum genus=Phaeospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein; K07028 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
cn_combo_scaffold_354_48
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(59756..62905)
-----------------
DNA (3150bp)
protein (1050aa)
SMP-30/gluconolaconase/LRE domain-containing protein id=12554961 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
SMP-30/Gluconolaconase/LRE domain protein {ECO:0000313|EMBL:ABJ86218.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Sol
SMP-30/gluconolaconase/LRE domain-containing protein
cn_combo_scaffold_354_49
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63211..64290)
-----------------
DNA (1080bp)
protein (360aa)
putative oxidoreductase id=12554962 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative oxidoreductase Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
putative oxidoreductase
cn_combo_scaffold_354_50
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(64361..65365)
-----------------
DNA (1005bp)
protein (335aa)
hypothetical protein id=12554963 bin=CNBR_ACIDO species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein {ECO:0000313|EMBL:EDY19215.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
cn_combo_scaffold_354_51
Sphingobium chinhatense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65571..65894)
-----------------
DNA (324bp)
protein (108aa)
hypothetical protein id=12554964 bin=CNBR_ACIDO species=Sphingobium chinhatense genus=Sphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein {ECO:0000313|EMBL:EPR17656.1}; TaxID=1346790 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chi
cn_combo_scaffold_354_52
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

66014..66730
-----------------
DNA (717bp)
protein (239aa)
hypothetical protein id=12554965 bin=CNBR_ACIDO species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
cn_combo_scaffold_354_53
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

66727..67494
-----------------
DNA (768bp)
protein (256aa)
helix-turn-helix domain-containing protein id=12554966 bin=CNBR_ACIDO species=Amycolatopsis nigrescens genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Putative transcriptional regulator {ECO:0000313|EMBL:ELQ90438.1}; TaxID=1214915 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis
helix-turn-helix domain-containing protein
cn_combo_scaffold_354_54
Saccharomonospora xinjiangensis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(67459..68874)
-----------------
DNA (1416bp)
protein (472aa)
beta-lactamase class C id=12554967 bin=CNBR_ACIDO species=Nonomuraea coxensis genus=Nonomuraea taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Penicillin-binding protein, beta-lactamase class C {ECO:0000313|EMBL:EID56019.1}; Flags: Precursor;; TaxID=882086 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomono
beta-lactamase class C
cn_combo_scaffold_354_55
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

69115..70011
-----------------
DNA (897bp)
protein (299aa)
hypothetical protein; K07104 id=12554968 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AHG88360.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_354_56
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70136..70708
-----------------
DNA (573bp)
protein (191aa)
putative flavoprotein id=12554969 bin=CNBR_ACIDO species=Rhodanobacter denitrificans genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative flavoprotein
Putative flavoprotein {ECO:0000313|EMBL:AGG87276.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter deni
cn_combo_scaffold_354_57
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(70712..71221)
-----------------
DNA (510bp)
protein (170aa)
hypothetical protein id=12554970 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45143.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
cn_combo_scaffold_354_58
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71355..71999
-----------------
DNA (645bp)
protein (215aa)
hypothetical protein id=12554971 bin=CNBR_ACIDO species=Herbaspirillum sp. JC206 genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB74157.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira mul
cn_combo_scaffold_354_59
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72137..72511)
-----------------
DNA (375bp)
protein (125aa)
cls3; cardiolipin synthetase (EC:2.7.8.-); K06131 cardiolipin synthase [EC:2.7.8.-] id=12554973 bin=CNBR_ACIDO species=Hydrocarboniphaga effusa genus=Hydrocarboniphaga taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phospholipase D/transphosphatidylase; K06131 cardiolipin synthase [EC:2.7.8.-] Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
Phospholipase D-like domain protein
cn_combo_scaffold_354_60
unknown

Not on your lists

comp(72499..73107)
-----------------
DNA (609bp)
protein (203aa)

This feature has no annotations

Displaying items 31-60 of 118 in total

View Taxonomy