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cn_combo_scaffold_354

Alias: ACIDO32_12

Search features with annotation key words

Displaying items 61-90 of 118 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_354_61
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73205..73984)
-----------------
DNA (780bp)
protein (260aa)
acetoin(diacetyl) reductase; K03366 (R,R)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.303] id=12554974 bin=CNBR_ACIDO species=Idiomarina loihiensis genus=Idiomarina taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Diacetyl reductase {ECO:0000313|EMBL:KIH76865.1}; TaxID=1121915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter f
acetoin(diacetyl) reductase
cn_combo_scaffold_354_62
Pseudomonas sp. HPB0071, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74190..74525
-----------------
DNA (336bp)
protein (112aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1203578 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales
alkylhydroperoxidase id=12554975 bin=CNBR_ACIDO species=Pseudomonas sp. HPB0071 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
alkylhydroperoxidase
cn_combo_scaffold_354_63
CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, Acidobacteria, Bacteria

Not on your lists

comp(75009..75344)
-----------------
DNA (336bp)
protein (112aa)
id=12554976 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12554976 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cn_combo_scaffold_354_64
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(75353..75670)
-----------------
DNA (318bp)
protein (106aa)
id=12554977 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12554977 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
cn_combo_scaffold_354_65
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(75698..76366)
-----------------
DNA (669bp)
protein (223aa)
hypothetical protein id=12554978 bin=CNBR_ACIDO species=Sphingobium japonicum genus=Sphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
cn_combo_scaffold_354_66
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(76363..77097)
-----------------
DNA (735bp)
protein (245aa)
hypothetical protein id=12554979 bin=CNBR_ACIDO species=unknown genus=Stenotrophomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein
cn_combo_scaffold_354_67
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(77097..77561)
-----------------
DNA (465bp)
protein (155aa)
nuclear export factor GLE1 id=12554980 bin=CNBR_ACIDO species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
nuclear export factor GLE1 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
nuclear export factor GLE1
cn_combo_scaffold_354_68
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

78636..80060
-----------------
DNA (1425bp)
protein (475aa)
outer membrane efflux protein; K15725 cobalt-zinc-cadmium resistance protein CzcC id=12554982 bin=CNBR_ACIDO species=Methylosarcina fibrata genus=Methylosarcina taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
outer membrane efflux protein; K15725 cobalt-zinc-cadmium resistance protein CzcC Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
outer membrane efflux protein
cn_combo_scaffold_354_69
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

80066..81568
-----------------
DNA (1503bp)
protein (501aa)
secretion protein HlyD; K15727 cobalt-zinc-cadmium resistance protein CzcB id=12554983 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
secretion protein HlyD; K15727 cobalt-zinc-cadmium resistance protein CzcB Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
secretion protein HlyD
cn_combo_scaffold_354_70
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

81579..84746
-----------------
DNA (3168bp)
protein (1056aa)
CzcA family heavy metal efflux pump; K15726 cobalt-zinc-cadmium resistance protein CzcA id=12554984 bin=CNBR_ACIDO species=Azoarcus toluclasticus genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
CzcA family heavy metal efflux pump; K15726 cobalt-zinc-cadmium resistance protein CzcA Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
CzcA family heavy metal efflux pump
cn_combo_scaffold_354_71
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

84746..85075
-----------------
DNA (330bp)
protein (110aa)
nitrogen regulatory protein P-II id=12554985 bin=CNBR_ACIDO species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
nitrogen regulatory protein P-II Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
nitrogen regulatory protein P-II
cn_combo_scaffold_354_72
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85072..86946
-----------------
DNA (1875bp)
protein (625aa)
cadmium transporting P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5] id=12554986 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EHR70978.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_00
Lead, cadmium, zinc and mercury transporting ATPase
cn_combo_scaffold_354_73

Not on your lists

87172..87510
-----------------
DNA (339bp)
protein (113aa)
hypothetical protein id=12554987 bin=CNBR_ACIDO species=Bacillus sp. 1NLA3E genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein {ECO:0000313|EMBL:AHN97852.1}; TaxID=1447236 species="Bacteria; environmental samples.;" source="uncultured bacterium lac121.;"
hypothetical protein
cn_combo_scaffold_354_74
CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, Acidobacteria, Bacteria

Not on your lists

88709..89005
-----------------
DNA (297bp)
protein (99aa)
id=12554988 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12554988 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cn_combo_scaffold_354_75
unknown

Not on your lists

89024..89197
-----------------
DNA (174bp)
protein (58aa)

This feature has no annotations

cn_combo_scaffold_354_76
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(89194..89385)
-----------------
DNA (192bp)
protein (64aa)
hypothetical protein id=12554989 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
cn_combo_scaffold_354_77
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(89583..90698)
-----------------
DNA (1116bp)
protein (372aa)
phage integrase family protein id=12554990 bin=CNBR_ACIDO species=Desulfococcus multivorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phage integrase protein (DNA breaking and rejoining enzyme) Tax=GWC2_Rokubacteria_70_16_curated
phage integrase family protein
cn_combo_scaffold_354_78
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(91271..91597)
-----------------
DNA (327bp)
protein (109aa)
id=12554991 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12556555 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
cn_combo_scaffold_354_79
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(91643..92023)
-----------------
DNA (381bp)
protein (127aa)
id=12554992 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12556554 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
cn_combo_scaffold_354_80
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(92224..92742)
-----------------
DNA (519bp)
protein (173aa)
radC; DNA repair protein RadC; K03630 DNA repair protein RadC id=12554993 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA repair protein RadC; K03630 DNA repair protein RadC Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
radC; DNA repair protein RadC
cn_combo_scaffold_354_81
RHI_RIF_OD1_01_48_17, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(93019..94125)
-----------------
DNA (1107bp)
protein (369aa)
hypothetical protein id=12554994 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_01_48_17_curated
hypothetical protein
cn_combo_scaffold_354_82
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(94290..95417)
-----------------
DNA (1128bp)
protein (376aa)
id=12554995 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12554995 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
cn_combo_scaffold_354_83
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(95552..95872)
-----------------
DNA (321bp)
protein (107aa)
id=12554996 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
id=12556555 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
cn_combo_scaffold_354_84
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(96509..98278)
-----------------
DNA (1770bp)
protein (590aa)
id=12554997 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Abortive phage infection protein Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
cn_combo_scaffold_354_85
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98634..99530)
-----------------
DNA (897bp)
protein (299aa)
hypothetical protein id=12554998 bin=CNBR_ACIDO species=Magnetospirillum sp. SO-1 genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein {ECO:0000313|EMBL:EME70983.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospi
hypothetical protein
cn_combo_scaffold_354_86
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99535..100428)
-----------------
DNA (894bp)
protein (298aa)
parB; plasmid partitioning protein; K03497 chromosome partitioning protein, ParB family id=12554999 bin=CNBR_ACIDO species=Magnetospirillum sp. SO-1 genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Chromosome (Plasmid) partitioning protein ParB {ECO:0000313|EMBL:KIM00566.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum
parB; plasmid partitioning protein
cn_combo_scaffold_354_87
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100425..101972)
-----------------
DNA (1548bp)
protein (516aa)
recombinase id=12555000 bin=CNBR_ACIDO species=Caulobacter sp. AP07 genus=Caulobacter taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Serine recombinase {ECO:0000313|EMBL:KIC55853.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.
recombinase
cn_combo_scaffold_354_88
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

102084..102446
-----------------
DNA (363bp)
protein (121aa)
hypothetical protein id=12555001 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein {ECO:0000313|EMBL:AHY52453.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium jap
hypothetical protein
cn_combo_scaffold_354_89
unknown

Not on your lists

102774..102911
-----------------
DNA (138bp)
protein (46aa)

This feature has no annotations

cn_combo_scaffold_354_90
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

103370..104164
-----------------
DNA (795bp)
protein (265aa)
DNA adenine methylase (EC:2.1.1.72)
DNA adenine methylase id=12555003 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA adenine methylase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Displaying items 61-90 of 118 in total

View Taxonomy