ggKbase home page

cn_combo_scaffold_354_80

Organism: CN-SCN_Acidobacteria_32xOld

near complete RP 52 / 55 MC: 3 BSCG 48 / 51 MC: 1 ASCG 12 / 38
Location: comp(92224..92742)

Top 3 Functional Annotations

Value Algorithm Source
radC; DNA repair protein RadC; K03630 DNA repair protein RadC id=12554993 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 173.0
  • Bit_score: 347
  • Evalue 9.60e-93
DNA repair protein RadC; K03630 DNA repair protein RadC Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 42.4
  • Coverage: 151.0
  • Bit_score: 124
  • Evalue 1.80e-25
radC; DNA repair protein RadC similarity KEGG
DB: KEGG
  • Identity: 41.3
  • Coverage: 150.0
  • Bit_score: 97
  • Evalue 4.80e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Acidobacteria_61_28 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 519
ATGACTGTCAGATCACTTGCCGCGCGCGTTTCGGCACCTACACACCGCGTCCGAGAACTGGTGTGCTCCTACCGTCCCCTCAGGGACCCGTCGGGTCGCATCGTCGACACACCCACACTGATGTTGAGCACCCCGAGCATGGCGGCCAGGGCGCTGGCGCCATTGATCGCGGATCAGGTCGTCGAGGTCTTCGGCGTGGCCTGCGTGTCCACGCGTCTGCGATTGCTCTCGTGGCACGTCGTGTCGCGCGGGACCCGCTCGAGCACGCCGATCTCGATGCCAGACGTCTTCGTGCCCGCGTGTCTCACACCGGGTACGACCGGGTTGATCGTCGTGCACAACCACCCGAGCGGCGAGCCCACACCAAGTCCCGAGGACGTGGCGCTGACGAGACGGCTCCAGACCGCGGCGGTCATCCTCGACATGCCGTTGCTGGATCACCTGATCGTCGGCGAAGGCGAGCGCTTCTACAGCTTCCGAGAGGTCGGACTCATCGGCTCGTGTCCGCCCTGGACCTAA
PROTEIN sequence
Length: 173
MTVRSLAARVSAPTHRVRELVCSYRPLRDPSGRIVDTPTLMLSTPSMAARALAPLIADQVVEVFGVACVSTRLRLLSWHVVSRGTRSSTPISMPDVFVPACLTPGTTGLIVVHNHPSGEPTPSPEDVALTRRLQTAAVILDMPLLDHLIVGEGERFYSFREVGLIGSCPPWT*