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cn_combo_scaffold_26

Alias: GEM22_1

Search features with annotation key words

Displaying items 1-30 of 287 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_26_1
Smithella sp. SCADC, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

317..3106
DNA (2790bp) protein (930aa)
Type I restriction-modification system, M subunit n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0AUQ5_SYNWW
N-6 DNA methylase {ECO:0000313|EMBL:KFO66356.1}; TaxID=1499107 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SCADC.;"
type I restriction-modification system, M subunit
cn_combo_scaffold_26_2
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3106..4356
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI0003641F5B
Uncharacterized protein {ECO:0000313|EMBL:KKG40135.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina maze
restriction endonuclease S subunits-like protein
cn_combo_scaffold_26_3
RLO_PLX_64_10, Bacteria

Not on your lists

4356..7487
DNA (3132bp) protein (1044aa)
type I restriction-modification system, R subunit; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Type I restriction-modification system, R subunit n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0AUQ7_SYNWW
type I restriction-modification system, R subunit
cn_combo_scaffold_26_4
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7532..8170
DNA (639bp) protein (213aa)
zinc metalloprotease (EC:3.4.24.-)
Zinc metalloprotease n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LY79_SYNAS
Zinc metalloprotease {ECO:0000313|EMBL:KKG55512.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (
cn_combo_scaffold_26_5
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8171..9958
DNA (1788bp) protein (596aa)
Metallophosphoesterase n=1 Tax=Thiocapsa marina 5811 RepID=F9UI84_9GAMM
Metallophosphoesterase {ECO:0000313|EMBL:EGV16089.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
signal transduction protein with Nacht domain
cn_combo_scaffold_26_6
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9955..12216
DNA (2262bp) protein (754aa)
Putative uncharacterized protein n=1 Tax=Thiocapsa marina 5811 RepID=F9UI83_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGV16088.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina
molecular chaperone of HSP90 family
cn_combo_scaffold_26_7
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12232..12477)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=U5NML4_9BACT
hypothetical protein Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
hypothetical protein
cn_combo_scaffold_26_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12961..13533
DNA (573bp) protein (191aa)
Conserved hypothetical integral membrane protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TL29_ALKMQ
protein of unknown function DUF81
Uncharacterized protein {ECO:0000313|EMBL:AHG92471.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_26_9
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13754..14161
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TTW7_9BRAD
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
hypothetical protein
cn_combo_scaffold_26_10
unknown

Not on your lists

14353..14820
DNA (468bp) protein (156aa)

This feature has no annotations

cn_combo_scaffold_26_11
unknown

Not on your lists

14992..15420
DNA (429bp) protein (143aa)

This feature has no annotations

cn_combo_scaffold_26_12
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(16101..16649)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000373E345
hypothetical protein Tax=RBG_16_Bathyarchaeota_57_9_curated
hypothetical protein
cn_combo_scaffold_26_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16847..19180
DNA (2334bp) protein (778aa)
transcriptional activator domain-containing protein
Transcriptional activator domain-containing protein {ECO:0000313|EMBL:AHG93244.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein id=16885997 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
cn_combo_scaffold_26_14
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19281..19886
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADM8_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40605.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
cn_combo_scaffold_26_15
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19927..21741
DNA (1815bp) protein (605aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADM9_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40606.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
cn_combo_scaffold_26_16
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21834..23150)
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A767_GEMAT
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAH38077.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
cn_combo_scaffold_26_17
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23320..24207
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ANF0_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO28992.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogen
cn_combo_scaffold_26_18
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

24207..25022
DNA (816bp) protein (272aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PAP2 family protein id=3282191 bin=GWC2_Nitrospirae-rel_56_14 species=Pseudomonas denitrificans genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
phosphatidic acid phosphatase
cn_combo_scaffold_26_19
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

25100..26656
DNA (1557bp) protein (519aa)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJW4_KORVE
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase {ECO:0000313|EMBL:ABF42836.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriacea
cn_combo_scaffold_26_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(26682..29753)
DNA (3072bp) protein (1024aa)
Glycosyl hydrolase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPP3_9BACT
BNR repeat-containing glycosyl hydrolase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
BNR repeat-containing glycosyl hydrolase
cn_combo_scaffold_26_21
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29783..30571)
DNA (789bp) protein (263aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002EC3614
3-methyl-2-oxobutanoate hydroxymethyltransferase
cn_combo_scaffold_26_22
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30625..31467)
DNA (843bp) protein (281aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAA
panC; pantoate--beta-alanine ligase (EC:6.3.2.1)
pantoate--beta-alanine ligase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5437
cn_combo_scaffold_26_23
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31464..32333)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E218CD
Uncharacterized protein {ECO:0000313|EMBL:KJL33773.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
cn_combo_scaffold_26_24
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(32399..34849)
DNA (2451bp) protein (817aa)
Permease n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZXW4_OPITP
permease Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
permease
cn_combo_scaffold_26_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(35037..35762)
DNA (726bp) protein (242aa)
Putative uncharacterized protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KFL9_9GAMM
peptidyl-prolyl cis-trans isomerase cyclophilin type
Peptidyl-prolyl cis-trans isomerase cyclophilin type {ECO:0000313|EMBL:AHG93412.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_26_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

35784..37073
DNA (1290bp) protein (430aa)
Helix-turn-helix, AraC domain-containing protein rbh
Helix-turn-helix, AraC domain-containing protein {ECO:0000313|EMBL:AHG88879.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
AraC family transcriptional regulator id=24556279 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Prevotella sp. oral taxon 472 genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
cn_combo_scaffold_26_27
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37258..38253
DNA (996bp) protein (332aa)
Hydrolase, alpha/beta fold family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFK8_9DELT
Hydrolase, alpha/beta fold family protein {ECO:0000313|EMBL:EDM75322.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis
hypothetical protein
cn_combo_scaffold_26_28
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

38262..38930
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00037ABD51
Uncharacterized protein {ECO:0000313|EMBL:KFF18578.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
hypothetical protein
cn_combo_scaffold_26_29
RBG_16_Chloroflexi_54_11_curated, Chloroflexi, Bacteria

Not on your lists

39023..39670
DNA (648bp) protein (216aa)
beta-lactamase n=1 Tax=Meiothermus timidus RepID=UPI000381FAF6
beta-lactamase domain-containing protein Tax=RBG_16_Chloroflexi_54_11_curated
beta-lactamase domain-containing protein
cn_combo_scaffold_26_30
unknown

Not on your lists

39740..40225
DNA (486bp) protein (162aa)

This feature has no annotations

Displaying items 1-30 of 287 in total

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